RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-205ENST00000350435 PPLO60437 1756 aa13.96□□□□□ -0.18
UBE2D3-205ENST00000350435 NUP155O75694 1391 aa13.96□□□□□ -0.18
UBE2D3-205ENST00000350435 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
UBE2D3-205ENST00000350435 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-205ENST00000350435 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-205ENST00000350435 KIAA1210Q9ULL0 1709 aa13.94□□□□□ -0.18
UBE2D3-205ENST00000350435 MLLT1Q03111 559 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-205ENST00000350435 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
UBE2D3-205ENST00000350435 ABCC11Q96J66 1382 aa13.93□□□□□ -0.18
UBE2D3-205ENST00000350435 BCL9O00512 1426 aa13.92□□□□□ -0.18
UBE2D3-205ENST00000350435 FSTL1Q12841 308 aa13.92□□□□□ -0.18
UBE2D3-205ENST00000350435 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
UBE2D3-205ENST00000350435 ACIN1Q9UKV3 1341 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-205ENST00000350435 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
UBE2D3-205ENST00000350435 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.18
UBE2D3-205ENST00000350435 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
UBE2D3-205ENST00000350435 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
UBE2D3-205ENST00000350435 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
UBE2D3-205ENST00000350435 CRB1P82279 1406 aa13.89□□□□□ -0.19
UBE2D3-205ENST00000350435 ANKRD30BQ9BXX2 1392 aa13.88□□□□□ -0.19
UBE2D3-205ENST00000350435 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
UBE2D3-205ENST00000350435 USP19O94966 1318 aa13.88□□□□□ -0.19
UBE2D3-205ENST00000350435 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
UBE2D3-205ENST00000350435 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
UBE2D3-205ENST00000350435 CD2APQ9Y5K6 639 aa13.86□□□□□ -0.19
UBE2D3-205ENST00000350435 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
UBE2D3-205ENST00000350435 NGDNQ8NEJ9 315 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-205ENST00000350435 COL5A2P05997 1499 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-205ENST00000350435 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
UBE2D3-205ENST00000350435 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
UBE2D3-205ENST00000350435 TFCP2L1Q9NZI6 479 aa13.84□□□□□ -0.19
UBE2D3-205ENST00000350435 BTAF1O14981 1849 aa13.84□□□□□ -0.19
UBE2D3-205ENST00000350435 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
UBE2D3-205ENST00000350435 YTHDC2Q9H6S0 1430 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-205ENST00000350435 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
UBE2D3-205ENST00000350435 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-205ENST00000350435 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-205ENST00000350435 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
UBE2D3-205ENST00000350435 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-205ENST00000350435 CPDO75976 1380 aa13.82□□□□□ -0.2
UBE2D3-205ENST00000350435 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
UBE2D3-205ENST00000350435 CICQ96RK0 1608 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-205ENST00000350435 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
UBE2D3-205ENST00000350435 RGS19P49795 217 aa13.79□□□□□ -0.2
UBE2D3-205ENST00000350435 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
UBE2D3-205ENST00000350435 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
UBE2D3-205ENST00000350435 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
UBE2D3-205ENST00000350435 SMC1BQ8NDV3 1235 aa13.78□□□□□ -0.2
UBE2D3-205ENST00000350435 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
UBE2D3-205ENST00000350435 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-205ENST00000350435 PIK3C2AO00443 1686 aa13.78□□□□□ -0.2
UBE2D3-205ENST00000350435 EXOC5O00471 708 aa13.77□□□□□ -0.21
UBE2D3-205ENST00000350435 FOXN1O15353 648 aa13.77□□□□□ -0.21
UBE2D3-205ENST00000350435 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
UBE2D3-205ENST00000350435 TRPM1Q7Z4N2 1603 aa13.76□□□□□ -0.21
UBE2D3-205ENST00000350435 SLC27A3Q5K4L6 730 aa13.76□□□□□ -0.21
UBE2D3-205ENST00000350435 PRAM1Q96QH2 718 aa13.76□□□□□ -0.21
UBE2D3-205ENST00000350435 USP6P35125 1406 aa13.75□□□□□ -0.21
UBE2D3-205ENST00000350435 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
UBE2D3-205ENST00000350435 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-205ENST00000350435 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
UBE2D3-205ENST00000350435 CCDC85CA6NKD9 419 aa13.74□□□□□ -0.21
UBE2D3-205ENST00000350435 POGKQ9P215 609 aa13.74□□□□□ -0.21
UBE2D3-205ENST00000350435 TNRC6CQ9HCJ0 1690 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-205ENST00000350435 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
UBE2D3-205ENST00000350435 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
UBE2D3-205ENST00000350435 CTCFP49711 727 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-205ENST00000350435 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
UBE2D3-205ENST00000350435 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
UBE2D3-205ENST00000350435 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
UBE2D3-205ENST00000350435 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.22
UBE2D3-205ENST00000350435 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 GCP02774 474 aa13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 KCNA4P22459 653 aa13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
UBE2D3-205ENST00000350435 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
UBE2D3-205ENST00000350435 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
UBE2D3-205ENST00000350435 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-205ENST00000350435 APLP2Q06481 763 aa13.69□□□□□ -0.22
UBE2D3-205ENST00000350435 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
UBE2D3-205ENST00000350435 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
UBE2D3-205ENST00000350435 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
UBE2D3-205ENST00000350435 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
UBE2D3-205ENST00000350435 NLRP13Q86W25 1043 aa13.67□□□□□ -0.22
UBE2D3-205ENST00000350435 LBX1P52954 281 aa13.66□□□□□ -0.22
UBE2D3-205ENST00000350435 KCNQ4P56696 695 aa13.66□□□□□ -0.22
UBE2D3-205ENST00000350435 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
UBE2D3-205ENST00000350435 ABCC6O95255 1503 aa13.65□□□□□ -0.22
UBE2D3-205ENST00000350435 LY75O60449 1722 aa13.65□□□□□ -0.22
UBE2D3-205ENST00000350435 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-205ENST00000350435 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
UBE2D3-205ENST00000350435 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms