RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ABCC1P33527 1531 aa21.88■■□□□ 1.09
APP-202ENST00000348990 PLEKHM2Q8IWE5 1019 aa21.87■■□□□ 1.09
APP-202ENST00000348990 MYOM2P54296 1465 aa21.87■■□□□ 1.09
APP-202ENST00000348990 NSD2O96028 1365 aa21.87■■□□□ 1.09
APP-202ENST00000348990 FCHSD2O94868 740 aa21.87■■□□□ 1.09
APP-202ENST00000348990 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
APP-202ENST00000348990 GNAI1P63096 354 aa21.86■■□□□ 1.09
APP-202ENST00000348990 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
APP-202ENST00000348990 ZNF445P59923 1031 aa21.85■■□□□ 1.09
APP-202ENST00000348990 DCTN1Q14203 1278 aa21.85■■□□□ 1.09
APP-202ENST00000348990 PRAM1Q96QH2 718 aa21.85■■□□□ 1.09
APP-202ENST00000348990 AK9Q5TCS8 1911 aa21.85■■□□□ 1.09
APP-202ENST00000348990 API5Q9BZZ5 524 aaKnown RBP21.85■■□□□ 1.09
APP-202ENST00000348990 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
APP-202ENST00000348990 USP26Q9BXU7 913 aa21.84■■□□□ 1.09
APP-202ENST00000348990 NEK4P51957 841 aa21.84■■□□□ 1.09
APP-202ENST00000348990 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
APP-202ENST00000348990 PLCB2Q00722 1185 aa21.83■■□□□ 1.09
APP-202ENST00000348990 TTC22Q5TAA0 569 aa21.83■■□□□ 1.09
APP-202ENST00000348990 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.08
APP-202ENST00000348990 NOL7Q9UMY1 257 aaKnown RBP21.83■■□□□ 1.08
APP-202ENST00000348990 NFE2L2Q16236 605 aa21.82■■□□□ 1.08
APP-202ENST00000348990 FAM83GA6ND36 823 aa21.82■■□□□ 1.08
APP-202ENST00000348990 GPT2Q8TD30 523 aa21.82■■□□□ 1.08
APP-202ENST00000348990 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
APP-202ENST00000348990 SDSP20132 328 aa21.81■■□□□ 1.08
APP-202ENST00000348990 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
APP-202ENST00000348990 TET3O43151 1660 aa21.81■■□□□ 1.08
APP-202ENST00000348990 FANCAO15360 1455 aa21.81■■□□□ 1.08
APP-202ENST00000348990 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
APP-202ENST00000348990 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
APP-202ENST00000348990 REC8O95072 547 aa21.8■■□□□ 1.08
APP-202ENST00000348990 TMEM63CQ9P1W3 806 aa21.8■■□□□ 1.08
APP-202ENST00000348990 ZKSCAN5Q9Y2L8 839 aa21.8■■□□□ 1.08
APP-202ENST00000348990 SLC4A10Q6U841 1118 aa21.79■■□□□ 1.08
APP-202ENST00000348990 CCDC39Q9UFE4 941 aa21.79■■□□□ 1.08
APP-202ENST00000348990 STAG3Q9UJ98 1225 aa21.79■■□□□ 1.08
APP-202ENST00000348990 NSFL1CQ9UNZ2 370 aaKnown RBP21.79■■□□□ 1.08
APP-202ENST00000348990 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
APP-202ENST00000348990 ARHGAP45Q92619 1136 aa21.79■■□□□ 1.08
APP-202ENST00000348990 ADGRL1O94910 1474 aa21.78■■□□□ 1.08
APP-202ENST00000348990 ATP7AQ04656 1500 aa21.78■■□□□ 1.08
APP-202ENST00000348990 PRDM10Q9NQV6 1147 aa21.78■■□□□ 1.08
APP-202ENST00000348990 EMILIN1Q9Y6C2 1016 aa21.78■■□□□ 1.08
APP-202ENST00000348990 GDPD2Q9HCC8 539 aa21.77■■□□□ 1.08
APP-202ENST00000348990 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
APP-202ENST00000348990 LRSAM1Q6UWE0 723 aa21.77■■□□□ 1.08
APP-202ENST00000348990 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
APP-202ENST00000348990 SHROOM2Q13796 1616 aa21.77■■□□□ 1.07
APP-202ENST00000348990 DCTPP1Q9H773 170 aa21.76■■□□□ 1.07
APP-202ENST00000348990 KIF1BO60333 1816 aa21.76■■□□□ 1.07
APP-202ENST00000348990 CLEC17AQ6ZS10 378 aa21.76■■□□□ 1.07
APP-202ENST00000348990 RPGRIP1LQ68CZ1 1315 aa21.76■■□□□ 1.07
APP-202ENST00000348990 KRT24Q2M2I5 525 aa21.76■■□□□ 1.07
APP-202ENST00000348990 TSHZ3Q63HK5 1081 aa21.76■■□□□ 1.07
APP-202ENST00000348990 MAP7D2Q96T17 732 aa21.76■■□□□ 1.07
APP-202ENST00000348990 IBTKQ9P2D0 1353 aaPredicted RBP21.75■■□□□ 1.07
APP-202ENST00000348990 HS1BP3Q53T59 392 aa21.75■■□□□ 1.07
APP-202ENST00000348990 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
APP-202ENST00000348990 POLKQ9UBT6 870 aa21.74■■□□□ 1.07
APP-202ENST00000348990 TRIM6-TRIM34B2RNG4 842 aa21.74■■□□□ 1.07
APP-202ENST00000348990 ERC2O15083 957 aa21.74■■□□□ 1.07
APP-202ENST00000348990 RILPL2Q969X0 211 aa21.73■■□□□ 1.07
APP-202ENST00000348990 ZNF830Q96NB3 372 aaPredicted RBP21.73■■□□□ 1.07
APP-202ENST00000348990 ZNF500O60304 480 aaPredicted RBP21.73■■□□□ 1.07
APP-202ENST00000348990 TSPY26PQ9H489 355 aa21.73■■□□□ 1.07
APP-202ENST00000348990 ANO2Q9NQ90 1003 aa21.73■■□□□ 1.07
APP-202ENST00000348990 ZDHHC9Q9Y397 364 aa21.73■■□□□ 1.07
APP-202ENST00000348990 QRICH2Q9H0J4 1663 aa21.73■■□□□ 1.07
APP-202ENST00000348990 PUS7Q96PZ0 661 aaKnown RBP21.72■■□□□ 1.07
APP-202ENST00000348990 ABCC4O15439 1325 aa21.72■■□□□ 1.07
APP-202ENST00000348990 MBD3O95983 291 aa21.71■■□□□ 1.07
APP-202ENST00000348990 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.71■■□□□ 1.07
APP-202ENST00000348990 KIAA2012Q0VF49 1180 aa21.71■■□□□ 1.07
APP-202ENST00000348990 IDI1Q13907 227 aa21.71■■□□□ 1.07
APP-202ENST00000348990 TMX3Q96JJ7 454 aa21.71■■□□□ 1.07
APP-202ENST00000348990 RRS1Q15050 365 aaKnown RBP21.71■■□□□ 1.07
APP-202ENST00000348990 SYAP1Q96A49 352 aaPredicted RBP21.71■■□□□ 1.07
APP-202ENST00000348990 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
APP-202ENST00000348990 SOX12O15370 315 aa21.7■■□□□ 1.06
APP-202ENST00000348990 SASS6Q6UVJ0 657 aa21.7■■□□□ 1.06
APP-202ENST00000348990 TSC1Q92574 1164 aa21.7■■□□□ 1.06
APP-202ENST00000348990 PDLIM2Q96JY6 352 aa21.7■■□□□ 1.06
APP-202ENST00000348990 UPF3BQ9BZI7 483 aaKnown RBP21.7■■□□□ 1.06
APP-202ENST00000348990 LMOD3Q0VAK6 560 aa21.7■■□□□ 1.06
APP-202ENST00000348990 MEIS3Q99687 375 aa21.7■■□□□ 1.06
APP-202ENST00000348990 MCCP23508 829 aa21.69■■□□□ 1.06
APP-202ENST00000348990 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
APP-202ENST00000348990 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.69■■□□□ 1.06
APP-202ENST00000348990 NPATQ14207 1427 aa21.69■■□□□ 1.06
APP-202ENST00000348990 TERF1P54274 439 aa21.68■■□□□ 1.06
APP-202ENST00000348990 ZRANB1Q9UGI0 708 aa21.68■■□□□ 1.06
APP-202ENST00000348990 BRPF1P55201 1214 aaPredicted RBP21.68■■□□□ 1.06
APP-202ENST00000348990 RPAP2Q8IXW5 612 aaPredicted RBP21.68■■□□□ 1.06
APP-202ENST00000348990 CFAP74Q9C0B2 1584 aa21.68■■□□□ 1.06
APP-202ENST00000348990 DYNC1I1O14576 645 aa21.67■■□□□ 1.06
APP-202ENST00000348990 EXOC6BQ9Y2D4 811 aa21.67■■□□□ 1.06
APP-202ENST00000348990 ADGRB2O60241 1585 aa21.67■■□□□ 1.06
APP-202ENST00000348990 HMMRO75330 724 aa21.67■■□□□ 1.06
APP-202ENST00000348990 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms