RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 NUCB2P80303 420 aa22.58■■□□□ 1.21
KRCC1-201ENST00000347055 TBC1D9Q6ZT07 1266 aa22.58■■□□□ 1.21
KRCC1-201ENST00000347055 ABCC4O15439 1325 aa22.58■■□□□ 1.21
KRCC1-201ENST00000347055 ZSCAN30Q86W11 494 aa22.58■■□□□ 1.2
KRCC1-201ENST00000347055 NASPP49321 788 aaPredicted RBP22.56■■□□□ 1.2
KRCC1-201ENST00000347055 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
KRCC1-201ENST00000347055 CABP2Q9NPB3 220 aa22.55■■□□□ 1.2
KRCC1-201ENST00000347055 FYB1O15117 783 aa22.55■■□□□ 1.2
KRCC1-201ENST00000347055 ANKRD45Q5TZF3 282 aa22.55■■□□□ 1.2
KRCC1-201ENST00000347055 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
KRCC1-201ENST00000347055 IFT57Q9NWB7 429 aa22.54■■□□□ 1.2
KRCC1-201ENST00000347055 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
KRCC1-201ENST00000347055 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.53■■□□□ 1.2
KRCC1-201ENST00000347055 GNAI1P63096 354 aa22.53■■□□□ 1.2
KRCC1-201ENST00000347055 HDGFL2Q7Z4V5 671 aaPredicted RBP22.53■■□□□ 1.2
KRCC1-201ENST00000347055 ATP7BP35670 1465 aa22.52■■□□□ 1.2
KRCC1-201ENST00000347055 API5Q9BZZ5 524 aaKnown RBP22.52■■□□□ 1.2
KRCC1-201ENST00000347055 OFD1O75665 1012 aa22.51■■□□□ 1.19
KRCC1-201ENST00000347055 GGNBP2Q9H3C7 697 aa22.51■■□□□ 1.19
KRCC1-201ENST00000347055 VAMP4O75379 141 aa22.5■■□□□ 1.19
KRCC1-201ENST00000347055 CYP2E1P05181 493 aaPredicted RBP22.5■■□□□ 1.19
KRCC1-201ENST00000347055 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
KRCC1-201ENST00000347055 PDCL3Q9H2J4 239 aa22.5■■□□□ 1.19
KRCC1-201ENST00000347055 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
KRCC1-201ENST00000347055 GAS2L2Q8NHY3 880 aa22.5■■□□□ 1.19
KRCC1-201ENST00000347055 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
KRCC1-201ENST00000347055 CD2BP2O95400 341 aaKnown RBP22.49■■□□□ 1.19
KRCC1-201ENST00000347055 SSFA2P28290 1259 aa22.49■■□□□ 1.19
KRCC1-201ENST00000347055 LMOD3Q0VAK6 560 aa22.49■■□□□ 1.19
KRCC1-201ENST00000347055 ZNF853P0CG23 659 aa22.48■■□□□ 1.19
KRCC1-201ENST00000347055 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
KRCC1-201ENST00000347055 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
KRCC1-201ENST00000347055 ARHGEF40Q8TER5 1519 aa22.47■■□□□ 1.19
KRCC1-201ENST00000347055 DLC1Q96QB1 1528 aa22.47■■□□□ 1.19
KRCC1-201ENST00000347055 MCM5P33992 734 aa22.47■■□□□ 1.19
KRCC1-201ENST00000347055 CDK12Q9NYV4 1490 aaPredicted RBP22.46■■□□□ 1.19
KRCC1-201ENST00000347055 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
KRCC1-201ENST00000347055 MAP7D2Q96T17 732 aa22.46■■□□□ 1.19
KRCC1-201ENST00000347055 CFAP65Q6ZU64 1925 aaKnown RBP22.46■■□□□ 1.19
KRCC1-201ENST00000347055 CPSF1Q10570 1443 aaKnown RBP22.46■■□□□ 1.19
KRCC1-201ENST00000347055 YTHDC2Q9H6S0 1430 aaKnown RBP22.46■■□□□ 1.19
KRCC1-201ENST00000347055 INTS3Q68E01 1043 aaKnown RBP22.45■■□□□ 1.19
KRCC1-201ENST00000347055 TMEM131LA2VDJ0 1609 aa22.45■■□□□ 1.19
KRCC1-201ENST00000347055 SIRT2Q8IXJ6 389 aa22.45■■□□□ 1.18
KRCC1-201ENST00000347055 PDLIM2Q96JY6 352 aa22.45■■□□□ 1.18
KRCC1-201ENST00000347055 DCTPP1Q9H773 170 aa22.45■■□□□ 1.18
KRCC1-201ENST00000347055 TTC22Q5TAA0 569 aa22.44■■□□□ 1.18
KRCC1-201ENST00000347055 CASC1Q6TDU7 716 aa22.44■■□□□ 1.18
KRCC1-201ENST00000347055 ZNF500O60304 480 aaPredicted RBP22.43■■□□□ 1.18
KRCC1-201ENST00000347055 PRKAR2BP31323 418 aa22.43■■□□□ 1.18
KRCC1-201ENST00000347055 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
KRCC1-201ENST00000347055 KIAA1211Q6ZU35 1233 aa22.43■■□□□ 1.18
KRCC1-201ENST00000347055 PLEKHM2Q8IWE5 1019 aa22.43■■□□□ 1.18
KRCC1-201ENST00000347055 PKNOX2Q96KN3 472 aa22.43■■□□□ 1.18
KRCC1-201ENST00000347055 ST18O60284 1047 aa22.42■■□□□ 1.18
KRCC1-201ENST00000347055 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
KRCC1-201ENST00000347055 NEO1Q92859 1461 aa22.41■■□□□ 1.18
KRCC1-201ENST00000347055 GSPT1P15170 499 aaKnown RBP22.41■■□□□ 1.18
KRCC1-201ENST00000347055 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
KRCC1-201ENST00000347055 LMBRD1Q9NUN5 540 aa22.41■■□□□ 1.18
KRCC1-201ENST00000347055 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
KRCC1-201ENST00000347055 DIP2CQ9Y2E4 1556 aa22.4■■□□□ 1.18
KRCC1-201ENST00000347055 GGT6Q6P531 493 aa22.4■■□□□ 1.18
KRCC1-201ENST00000347055 PREX1Q8TCU6 1659 aa22.4■■□□□ 1.18
KRCC1-201ENST00000347055 ZSCAN23Q3MJ62 389 aa22.4■■□□□ 1.18
KRCC1-201ENST00000347055 RPAP2Q8IXW5 612 aaPredicted RBP22.4■■□□□ 1.18
KRCC1-201ENST00000347055 CSPP1Q1MSJ5 1256 aa22.39■■□□□ 1.17
KRCC1-201ENST00000347055 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.17
KRCC1-201ENST00000347055 TWISTNBQ3B726 338 aaPredicted RBP22.38■■□□□ 1.17
KRCC1-201ENST00000347055 MTERF4Q7Z6M4 381 aaKnown RBP22.38■■□□□ 1.17
KRCC1-201ENST00000347055 VSIG10Q8N0Z9 540 aa22.38■■□□□ 1.17
KRCC1-201ENST00000347055 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
KRCC1-201ENST00000347055 REC8O95072 547 aa22.37■■□□□ 1.17
KRCC1-201ENST00000347055 ANKRD44Q8N8A2 993 aa22.37■■□□□ 1.17
KRCC1-201ENST00000347055 POLKQ9UBT6 870 aa22.37■■□□□ 1.17
KRCC1-201ENST00000347055 ATP10DQ9P241 1426 aa22.37■■□□□ 1.17
KRCC1-201ENST00000347055 MAP2P11137 1827 aaKnown RBP22.36■■□□□ 1.17
KRCC1-201ENST00000347055 MYO5BQ9ULV0 1848 aa22.36■■□□□ 1.17
KRCC1-201ENST00000347055 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
KRCC1-201ENST00000347055 MBIPQ9NS73 344 aa22.36■■□□□ 1.17
KRCC1-201ENST00000347055 RIMS2Q9UQ26 1411 aa22.36■■□□□ 1.17
KRCC1-201ENST00000347055 MBD3O95983 291 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 FOXD4L1Q9NU39 408 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 DLG5Q8TDM6 1919 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 MCM2P49736 904 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 EDC4Q6P2E9 1401 aaKnown RBP22.35■■□□□ 1.17
KRCC1-201ENST00000347055 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
KRCC1-201ENST00000347055 ZMYND15Q9H091 742 aa22.34■■□□□ 1.17
KRCC1-201ENST00000347055 CAVIN1Q6NZI2 390 aaKnown RBP22.33■■□□□ 1.17
KRCC1-201ENST00000347055 IDI1Q13907 227 aa22.33■■□□□ 1.16
KRCC1-201ENST00000347055 NRKQ7Z2Y5 1582 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 MINK1Q8N4C8 1332 aaPredicted RBP22.32■■□□□ 1.16
KRCC1-201ENST00000347055 IL13P35225 146 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 LRSAM1Q6UWE0 723 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 CDK19Q9BWU1 502 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 CCDC39Q9UFE4 941 aa22.32■■□□□ 1.16
KRCC1-201ENST00000347055 KLHL34Q8N239 644 aa22.31■■□□□ 1.16
KRCC1-201ENST00000347055 ZKSCAN5Q9Y2L8 839 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms