RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FLT4P35916 1363 aa14.49□□□□□ -0.09
ECM1-201ENST00000346569 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
ECM1-201ENST00000346569 HOXC9P31274 260 aa14.49□□□□□ -0.09
ECM1-201ENST00000346569 WWC1Q8IX03 1113 aa14.49□□□□□ -0.09
ECM1-201ENST00000346569 SOS2Q07890 1332 aaPredicted RBP14.48□□□□□ -0.09
ECM1-201ENST00000346569 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
ECM1-201ENST00000346569 PXDNQ92626 1479 aa14.48□□□□□ -0.09
ECM1-201ENST00000346569 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
ECM1-201ENST00000346569 ARHGEF25Q86VW2 580 aa14.48□□□□□ -0.09
ECM1-201ENST00000346569 IP6K1Q92551 441 aa14.48□□□□□ -0.09
ECM1-201ENST00000346569 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
ECM1-201ENST00000346569 SLFN5Q08AF3 891 aa14.47□□□□□ -0.09
ECM1-201ENST00000346569 LMOD2Q6P5Q4 547 aa14.47□□□□□ -0.09
ECM1-201ENST00000346569 ILDR2Q71H61 639 aa14.47□□□□□ -0.09
ECM1-201ENST00000346569 SLIT3O75094 1523 aa14.47□□□□□ -0.09
ECM1-201ENST00000346569 NFAT5O94916 1531 aa14.47□□□□□ -0.09
ECM1-201ENST00000346569 MED1Q15648 1581 aaPredicted RBP14.46□□□□□ -0.09
ECM1-201ENST00000346569 ALS2Q96Q42 1657 aa14.46□□□□□ -0.09
ECM1-201ENST00000346569 HMOX1P09601 288 aa14.46□□□□□ -0.09
ECM1-201ENST00000346569 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
ECM1-201ENST00000346569 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
ECM1-201ENST00000346569 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
ECM1-201ENST00000346569 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
ECM1-201ENST00000346569 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
ECM1-201ENST00000346569 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
ECM1-201ENST00000346569 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
ECM1-201ENST00000346569 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
ECM1-201ENST00000346569 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
ECM1-201ENST00000346569 EYA1Q99502 592 aa14.44□□□□□ -0.1
ECM1-201ENST00000346569 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
ECM1-201ENST00000346569 TNS3Q68CZ2 1445 aa14.43□□□□□ -0.1
ECM1-201ENST00000346569 SULT6B1Q6IMI4 303 aa14.43□□□□□ -0.1
ECM1-201ENST00000346569 ROBO1Q9Y6N7 1651 aa14.43□□□□□ -0.1
ECM1-201ENST00000346569 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
ECM1-201ENST00000346569 RNF123Q5XPI4 1314 aa14.42□□□□□ -0.1
ECM1-201ENST00000346569 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
ECM1-201ENST00000346569 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
ECM1-201ENST00000346569 ARHGEF10O15013 1369 aa14.42□□□□□ -0.1
ECM1-201ENST00000346569 E9PSI1 815 aa14.41□□□□□ -0.1
ECM1-201ENST00000346569 RIPK4P57078 832 aa14.41□□□□□ -0.1
ECM1-201ENST00000346569 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
ECM1-201ENST00000346569 KDRP35968 1356 aa14.41□□□□□ -0.1
ECM1-201ENST00000346569 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
ECM1-201ENST00000346569 PHRF1Q9P1Y6 1649 aaKnown RBP14.4□□□□□ -0.1
ECM1-201ENST00000346569 NEFMP07197 916 aa14.4□□□□□ -0.1
ECM1-201ENST00000346569 AXIN2Q9Y2T1 843 aa14.4□□□□□ -0.1
ECM1-201ENST00000346569 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
ECM1-201ENST00000346569 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
ECM1-201ENST00000346569 IL16Q14005 1332 aa14.38□□□□□ -0.11
ECM1-201ENST00000346569 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
ECM1-201ENST00000346569 NBPF6Q5VWK0 638 aa14.37□□□□□ -0.11
ECM1-201ENST00000346569 LTV1Q96GA3 475 aaPredicted RBP14.37□□□□□ -0.11
ECM1-201ENST00000346569 NBPF4Q96M43 638 aa14.37□□□□□ -0.11
ECM1-201ENST00000346569 RCAN3Q9UKA8 241 aa14.37□□□□□ -0.11
ECM1-201ENST00000346569 CPDO75976 1380 aa14.36□□□□□ -0.11
ECM1-201ENST00000346569 LTN1O94822 1766 aa14.36□□□□□ -0.11
ECM1-201ENST00000346569 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
ECM1-201ENST00000346569 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
ECM1-201ENST00000346569 ANKRD24Q8TF21 1146 aa14.35□□□□□ -0.11
ECM1-201ENST00000346569 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
ECM1-201ENST00000346569 SOCS7O14512 581 aa14.34□□□□□ -0.11
ECM1-201ENST00000346569 FKBP8Q14318 412 aa14.33□□□□□ -0.11
ECM1-201ENST00000346569 MTHFSDQ2M296 383 aaKnown RBP14.33□□□□□ -0.11
ECM1-201ENST00000346569 CRYBG1Q9Y4K1 1723 aa14.33□□□□□ -0.12
ECM1-201ENST00000346569 NCAPD2Q15021 1401 aa14.33□□□□□ -0.12
ECM1-201ENST00000346569 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
ECM1-201ENST00000346569 LMOD3Q0VAK6 560 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 COL18A1P39060 1754 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 ERBB3P21860 1342 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 NEFLP07196 543 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
ECM1-201ENST00000346569 AHDC1Q5TGY3 1603 aaPredicted RBP14.31□□□□□ -0.12
ECM1-201ENST00000346569 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
ECM1-201ENST00000346569 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
ECM1-201ENST00000346569 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
ECM1-201ENST00000346569 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
ECM1-201ENST00000346569 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
ECM1-201ENST00000346569 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
ECM1-201ENST00000346569 ERICH6BQ5W0A0 696 aa14.3□□□□□ -0.12
ECM1-201ENST00000346569 GAS2L2Q8NHY3 880 aa14.3□□□□□ -0.12
ECM1-201ENST00000346569 ABCC6O95255 1503 aa14.3□□□□□ -0.12
ECM1-201ENST00000346569 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
ECM1-201ENST00000346569 RRP1P56182 461 aaKnown RBP14.29□□□□□ -0.12
ECM1-201ENST00000346569 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
ECM1-201ENST00000346569 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
ECM1-201ENST00000346569 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
ECM1-201ENST00000346569 IFT57Q9NWB7 429 aa14.28□□□□□ -0.12
ECM1-201ENST00000346569 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
ECM1-201ENST00000346569 CT47B1P0C2W7 299 aaPredicted RBP14.27□□□□□ -0.12
ECM1-201ENST00000346569 GNAI1P63096 354 aa14.27□□□□□ -0.12
ECM1-201ENST00000346569 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.12
ECM1-201ENST00000346569 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
ECM1-201ENST00000346569 DLG5Q8TDM6 1919 aa14.26□□□□□ -0.13
ECM1-201ENST00000346569 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
ECM1-201ENST00000346569 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
ECM1-201ENST00000346569 RGPD5Q99666 1765 aa14.26□□□□□ -0.13
ECM1-201ENST00000346569 JCADQ9P266 1359 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 CHL1O00533 1208 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms