RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
CLCN6-202ENST00000346436 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-202ENST00000346436 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 AAMPQ13685 434 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 AK7Q96M32 723 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 FYB1O15117 783 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 CDC45O75419 566 aa13.12□□□□□ -0.31
CLCN6-202ENST00000346436 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-202ENST00000346436 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
CLCN6-202ENST00000346436 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-202ENST00000346436 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-202ENST00000346436 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
CLCN6-202ENST00000346436 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
CLCN6-202ENST00000346436 FBLN1P23142 703 aa13.11□□□□□ -0.31
CLCN6-202ENST00000346436 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
CLCN6-202ENST00000346436 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-202ENST00000346436 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
CLCN6-202ENST00000346436 REC8O95072 547 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 XBP1P17861 261 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
CLCN6-202ENST00000346436 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
CLCN6-202ENST00000346436 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
CLCN6-202ENST00000346436 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
CLCN6-202ENST00000346436 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-202ENST00000346436 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
CLCN6-202ENST00000346436 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
CLCN6-202ENST00000346436 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.31
CLCN6-202ENST00000346436 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.31
CLCN6-202ENST00000346436 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.31
CLCN6-202ENST00000346436 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.31
CLCN6-202ENST00000346436 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.31
CLCN6-202ENST00000346436 RNF214Q8ND24 703 aa13.08□□□□□ -0.31
CLCN6-202ENST00000346436 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
CLCN6-202ENST00000346436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-202ENST00000346436 MCM4P33991 863 aa13.08□□□□□ -0.32
CLCN6-202ENST00000346436 MRE11P49959 708 aa13.08□□□□□ -0.32
CLCN6-202ENST00000346436 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
CLCN6-202ENST00000346436 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
CLCN6-202ENST00000346436 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.32
CLCN6-202ENST00000346436 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.32
CLCN6-202ENST00000346436 SYCP2Q9BX26 1530 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
CLCN6-202ENST00000346436 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 TRIM27P14373 513 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 BICDL1Q6ZP65 573 aa13.07□□□□□ -0.32
CLCN6-202ENST00000346436 A0A087WZG4 1122 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 SEC24BO95487 1268 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
CLCN6-202ENST00000346436 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■■ 28.9
CLCN6-202ENST00000346436 NOS1P29475 1434 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 TPM3P06753 285 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-202ENST00000346436 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 ITSN2Q9NZM3 1697 aa13.06□□□□□ -0.32
CLCN6-202ENST00000346436 GNAI3P08754 354 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
CLCN6-202ENST00000346436 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 ATP6V1DQ9Y5K8 247 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 CEBPAP49715 358 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-202ENST00000346436 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 RLBP1P12271 317 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 NEK4P51957 841 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
CLCN6-202ENST00000346436 HOOK1Q9UJC3 728 aaKnown RBP13.05□□□□□ -0.32
CLCN6-202ENST00000346436 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 TNRQ92752 1358 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 ERC1Q8IUD2 1116 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 PAF1Q8N7H5 531 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
CLCN6-202ENST00000346436 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 MPNDQ8N594 471 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 CARD14Q9BXL6 1004 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 NUCB2P80303 420 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
CLCN6-202ENST00000346436 TPM1P09493 284 aa13.03□□□□□ -0.32
CLCN6-202ENST00000346436 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms