RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 NFAT5O94916 1531 aa17.06■□□□□ 0.32
SPO11-201ENST00000345868 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
SPO11-201ENST00000345868 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
SPO11-201ENST00000345868 USP19O94966 1318 aa17.05■□□□□ 0.32
SPO11-201ENST00000345868 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
SPO11-201ENST00000345868 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
SPO11-201ENST00000345868 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
SPO11-201ENST00000345868 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
SPO11-201ENST00000345868 HOXC9P31274 260 aa17.04■□□□□ 0.32
SPO11-201ENST00000345868 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
SPO11-201ENST00000345868 FKBP8Q14318 412 aa17.04■□□□□ 0.32
SPO11-201ENST00000345868 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
SPO11-201ENST00000345868 SLIT3O75094 1523 aa17.04■□□□□ 0.32
SPO11-201ENST00000345868 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
SPO11-201ENST00000345868 PXDNQ92626 1479 aa17.03■□□□□ 0.32
SPO11-201ENST00000345868 E9PSI1 815 aa17.03■□□□□ 0.32
SPO11-201ENST00000345868 GCP02774 474 aa17.03■□□□□ 0.32
SPO11-201ENST00000345868 NEFMP07197 916 aa17.02■□□□□ 0.32
SPO11-201ENST00000345868 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
SPO11-201ENST00000345868 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.31
SPO11-201ENST00000345868 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 TRIM35Q9UPQ4 493 aa17.01■□□□□ 0.31
SPO11-201ENST00000345868 ALS2Q96Q42 1657 aa17■□□□□ 0.31
SPO11-201ENST00000345868 RIPK4P57078 832 aa17■□□□□ 0.31
SPO11-201ENST00000345868 IP6K1Q92551 441 aa17■□□□□ 0.31
SPO11-201ENST00000345868 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
SPO11-201ENST00000345868 EYA1Q99502 592 aa16.98■□□□□ 0.31
SPO11-201ENST00000345868 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
SPO11-201ENST00000345868 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
SPO11-201ENST00000345868 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
SPO11-201ENST00000345868 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
SPO11-201ENST00000345868 KDRP35968 1356 aa16.97■□□□□ 0.31
SPO11-201ENST00000345868 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
SPO11-201ENST00000345868 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
SPO11-201ENST00000345868 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
SPO11-201ENST00000345868 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
SPO11-201ENST00000345868 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
SPO11-201ENST00000345868 IL16Q14005 1332 aa16.93■□□□□ 0.3
SPO11-201ENST00000345868 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
SPO11-201ENST00000345868 LTN1O94822 1766 aa16.92■□□□□ 0.3
SPO11-201ENST00000345868 ZC3H6P61129 1189 aaKnown RBP16.92■□□□□ 0.3
SPO11-201ENST00000345868 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
SPO11-201ENST00000345868 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
SPO11-201ENST00000345868 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
SPO11-201ENST00000345868 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
SPO11-201ENST00000345868 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
SPO11-201ENST00000345868 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
SPO11-201ENST00000345868 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
SPO11-201ENST00000345868 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
SPO11-201ENST00000345868 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
SPO11-201ENST00000345868 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
SPO11-201ENST00000345868 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
SPO11-201ENST00000345868 CPDO75976 1380 aa16.88■□□□□ 0.29
SPO11-201ENST00000345868 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
SPO11-201ENST00000345868 MTHFSDQ2M296 383 aaKnown RBP16.88■□□□□ 0.29
SPO11-201ENST00000345868 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
SPO11-201ENST00000345868 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
SPO11-201ENST00000345868 NHSL1Q5SYE7 1610 aa16.87■□□□□ 0.29
SPO11-201ENST00000345868 ERBB3P21860 1342 aa16.86■□□□□ 0.29
SPO11-201ENST00000345868 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
SPO11-201ENST00000345868 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
SPO11-201ENST00000345868 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
SPO11-201ENST00000345868 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SPO11-201ENST00000345868 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
SPO11-201ENST00000345868 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
SPO11-201ENST00000345868 PLIN1O60240 522 aa16.85■□□□□ 0.29
SPO11-201ENST00000345868 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
SPO11-201ENST00000345868 ABCC6O95255 1503 aa16.84■□□□□ 0.29
SPO11-201ENST00000345868 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
SPO11-201ENST00000345868 ZNF853P0CG23 659 aa16.83■□□□□ 0.28
SPO11-201ENST00000345868 GNAI1P63096 354 aa16.83■□□□□ 0.28
SPO11-201ENST00000345868 BCAR3O75815 825 aa16.82■□□□□ 0.28
SPO11-201ENST00000345868 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
SPO11-201ENST00000345868 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
SPO11-201ENST00000345868 MCM10Q7L590 875 aa16.82■□□□□ 0.28
SPO11-201ENST00000345868 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
SPO11-201ENST00000345868 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
SPO11-201ENST00000345868 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
SPO11-201ENST00000345868 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
SPO11-201ENST00000345868 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
SPO11-201ENST00000345868 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
SPO11-201ENST00000345868 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
SPO11-201ENST00000345868 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
SPO11-201ENST00000345868 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
SPO11-201ENST00000345868 MBIPQ9NS73 344 aa16.8■□□□□ 0.28
SPO11-201ENST00000345868 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
SPO11-201ENST00000345868 CAMTA1Q9Y6Y1 1673 aa16.8■□□□□ 0.28
SPO11-201ENST00000345868 COL18A1P39060 1754 aa16.8■□□□□ 0.28
SPO11-201ENST00000345868 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
SPO11-201ENST00000345868 CRB1P82279 1406 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms