RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 DDX49Q9Y6V7 483 aaKnown RBP22.11■■□□□ 1.13
VHL-202ENST00000345392 PIK3C2BO00750 1634 aa22.1■■□□□ 1.13
VHL-202ENST00000345392 ALDH1L2Q3SY69 923 aa22.1■■□□□ 1.13
VHL-202ENST00000345392 PKNOX2Q96KN3 472 aa22.1■■□□□ 1.13
VHL-202ENST00000345392 ELL2O00472 640 aaPredicted RBP22.1■■□□□ 1.13
VHL-202ENST00000345392 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
VHL-202ENST00000345392 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
VHL-202ENST00000345392 SIRT2Q8IXJ6 389 aa22.09■■□□□ 1.13
VHL-202ENST00000345392 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
VHL-202ENST00000345392 GCC1Q96CN9 775 aa22.08■■□□□ 1.13
VHL-202ENST00000345392 GOLGA6L22H0YM25 854 aa22.08■■□□□ 1.12
VHL-202ENST00000345392 BAG4O95429 457 aaKnown RBP22.08■■□□□ 1.12
VHL-202ENST00000345392 PTMSP20962 102 aa22.08■■□□□ 1.12
VHL-202ENST00000345392 COL3A1P02461 1466 aaPredicted RBP22.08■■□□□ 1.12
VHL-202ENST00000345392 CCDC173Q0VFZ6 552 aa22.07■■□□□ 1.12
VHL-202ENST00000345392 PUS7Q96PZ0 661 aaKnown RBP22.07■■□□□ 1.12
VHL-202ENST00000345392 CDK19Q9BWU1 502 aa22.07■■□□□ 1.12
VHL-202ENST00000345392 TERF2IPQ9NYB0 399 aa22.07■■□□□ 1.12
VHL-202ENST00000345392 TSPYL6Q8N831 410 aa22.06■■□□□ 1.12
VHL-202ENST00000345392 CD163L1Q9NR16 1453 aa22.06■■□□□ 1.12
VHL-202ENST00000345392 KIAA1211Q6ZU35 1233 aa22.06■■□□□ 1.12
VHL-202ENST00000345392 AK9Q5TCS8 1911 aa22.06■■□□□ 1.12
VHL-202ENST00000345392 PTPRMP28827 1452 aa22.05■■□□□ 1.12
VHL-202ENST00000345392 HMOX1P09601 288 aa22.05■■□□□ 1.12
VHL-202ENST00000345392 NCLP19338 710 aaKnown RBP22.05■■□□□ 1.12
VHL-202ENST00000345392 KLHL40Q2TBA0 621 aa22.05■■□□□ 1.12
VHL-202ENST00000345392 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
VHL-202ENST00000345392 PRKAR2BP31323 418 aa22.04■■□□□ 1.12
VHL-202ENST00000345392 MCTP1Q6DN14 999 aa22.04■■□□□ 1.12
VHL-202ENST00000345392 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
VHL-202ENST00000345392 PPP1R9BQ96SB3 815 aa22.04■■□□□ 1.12
VHL-202ENST00000345392 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
VHL-202ENST00000345392 VAMP4O75379 141 aa22.03■■□□□ 1.12
VHL-202ENST00000345392 ANP32BQ92688 251 aaKnown RBP22.03■■□□□ 1.12
VHL-202ENST00000345392 YTHDC2Q9H6S0 1430 aaKnown RBP22.03■■□□□ 1.12
VHL-202ENST00000345392 MRPL50Q8N5N7 158 aaKnown RBP22.03■■□□□ 1.12
VHL-202ENST00000345392 GSPT1P15170 499 aaKnown RBP22.03■■□□□ 1.12
VHL-202ENST00000345392 ZSCAN30Q86W11 494 aa22.03■■□□□ 1.12
VHL-202ENST00000345392 CDC45O75419 566 aa22.02■■□□□ 1.12
VHL-202ENST00000345392 SLC52A1Q9NWF4 448 aa22.02■■□□□ 1.12
VHL-202ENST00000345392 TPM2P07951 284 aa22.02■■□□□ 1.11
VHL-202ENST00000345392 PKP1Q13835 747 aa22.02■■□□□ 1.11
VHL-202ENST00000345392 CAVIN1Q6NZI2 390 aaKnown RBP22.02■■□□□ 1.11
VHL-202ENST00000345392 HDGFL2Q7Z4V5 671 aaPredicted RBP22.02■■□□□ 1.11
VHL-202ENST00000345392 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
VHL-202ENST00000345392 ATAD2Q6PL18 1390 aa22.01■■□□□ 1.11
VHL-202ENST00000345392 MED14O60244 1454 aa22.01■■□□□ 1.11
VHL-202ENST00000345392 CLEC17AQ6ZS10 378 aa22■■□□□ 1.11
VHL-202ENST00000345392 FCHSD2O94868 740 aa21.99■■□□□ 1.11
VHL-202ENST00000345392 MSNP26038 577 aaKnown RBP21.99■■□□□ 1.11
VHL-202ENST00000345392 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
VHL-202ENST00000345392 BRPF1P55201 1214 aaPredicted RBP21.98■■□□□ 1.11
VHL-202ENST00000345392 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
VHL-202ENST00000345392 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
VHL-202ENST00000345392 PLEKHM2Q8IWE5 1019 aa21.97■■□□□ 1.11
VHL-202ENST00000345392 EMILIN1Q9Y6C2 1016 aa21.97■■□□□ 1.11
VHL-202ENST00000345392 POLKQ9UBT6 870 aa21.97■■□□□ 1.11
VHL-202ENST00000345392 TMEM131LA2VDJ0 1609 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 ZSCAN23Q3MJ62 389 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
VHL-202ENST00000345392 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
VHL-202ENST00000345392 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.11
VHL-202ENST00000345392 LMBRD1Q9NUN5 540 aa21.95■■□□□ 1.1
VHL-202ENST00000345392 OFD1O75665 1012 aa21.95■■□□□ 1.1
VHL-202ENST00000345392 RABEP1Q15276 862 aa21.95■■□□□ 1.1
VHL-202ENST00000345392 RBSNQ9H1K0 784 aa21.95■■□□□ 1.1
VHL-202ENST00000345392 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 PNPLA6Q8IY17 1366 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 IBTKQ9P2D0 1353 aaPredicted RBP21.94■■□□□ 1.1
VHL-202ENST00000345392 ZNF445P59923 1031 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 RBM10P98175 930 aaKnown RBP21.94■■□□□ 1.1
VHL-202ENST00000345392 CHAMP1Q96JM3 812 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 PREX1Q8TCU6 1659 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 ABCC4O15439 1325 aa21.94■■□□□ 1.1
VHL-202ENST00000345392 RBM27Q9P2N5 1060 aaKnown RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 ZGPATQ8N5A5 531 aaKnown RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 USP26Q9BXU7 913 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 ZFYVE9O95405 1425 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 PIK3R4Q99570 1358 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 PRPF40AO75400 957 aaKnown RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 PRIM1P49642 420 aaKnown RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 NUCB2P80303 420 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 TWISTNBQ3B726 338 aaPredicted RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 OTUD7AQ8TE49 926 aaPredicted RBP21.93■■□□□ 1.1
VHL-202ENST00000345392 PDCL3Q9H2J4 239 aa21.93■■□□□ 1.1
VHL-202ENST00000345392 PTCH1Q13635 1447 aa21.92■■□□□ 1.1
VHL-202ENST00000345392 NME9Q86XW9 330 aa21.92■■□□□ 1.1
VHL-202ENST00000345392 C8orf58Q8NAV2 365 aa21.92■■□□□ 1.1
VHL-202ENST00000345392 APBB1O00213 710 aa21.92■■□□□ 1.1
VHL-202ENST00000345392 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
VHL-202ENST00000345392 CYP2E1P05181 493 aaPredicted RBP21.91■■□□□ 1.1
VHL-202ENST00000345392 TTC22Q5TAA0 569 aa21.91■■□□□ 1.1
VHL-202ENST00000345392 R3HCC1Q9Y3T6 440 aaKnown RBP21.91■■□□□ 1.1
VHL-202ENST00000345392 GNAI1P63096 354 aa21.9■■□□□ 1.1
VHL-202ENST00000345392 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms