RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
RNF41-201ENST00000345093 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
RNF41-201ENST00000345093 NACAP1Q9BZK3 213 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 BAG6P46379 1132 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 ATP7AQ04656 1500 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
RNF41-201ENST00000345093 RAD21O60216 631 aa11.87□□□□□ -0.51
RNF41-201ENST00000345093 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
RNF41-201ENST00000345093 FMNL2Q96PY5 1086 aa11.87□□□□□ -0.51
RNF41-201ENST00000345093 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
RNF41-201ENST00000345093 XPCQ01831 940 aaPredicted RBP11.87□□□□□ -0.51
RNF41-201ENST00000345093 DDB1Q16531 1140 aa11.87□□□□□ -0.51
RNF41-201ENST00000345093 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
RNF41-201ENST00000345093 CLASRPQ8N2M8 674 aaKnown RBP11.87□□□□□ -0.51
RNF41-201ENST00000345093 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
RNF41-201ENST00000345093 CRBNQ96SW2 442 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 RFC4P35249 363 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 PPP1R42Q7Z4L9 355 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 FAM184AQ8NB25 1140 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
RNF41-201ENST00000345093 NEUROD6Q96NK8 337 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
RNF41-201ENST00000345093 SAFBQ15424 915 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF41-201ENST00000345093 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
RNF41-201ENST00000345093 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
RNF41-201ENST00000345093 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
RNF41-201ENST00000345093 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
RNF41-201ENST00000345093 CPLX1O14810 134 aa11.85□□□□□ -0.51
RNF41-201ENST00000345093 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
RNF41-201ENST00000345093 GSE1Q14687 1217 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 WAPLQ7Z5K2 1190 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 LARP1Q6PKG0 1096 aaKnown RBP11.84□□□□□ -0.51
RNF41-201ENST00000345093 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 NSD3Q9BZ95 1437 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
RNF41-201ENST00000345093 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 R3HCC1Q9Y3T6 440 aaKnown RBP11.84□□□□□ -0.51
RNF41-201ENST00000345093 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
RNF41-201ENST00000345093 CAVIN4Q5BKX8 364 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 FLAD1Q8NFF5 587 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 H3BQV1 296 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
RNF41-201ENST00000345093 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
RNF41-201ENST00000345093 CLUAP1Q96AJ1 413 aa11.83□□□□□ -0.52
RNF41-201ENST00000345093 GNAI2P04899 355 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 PSMA5P28066 241 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 HSPA2P54652 639 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
RNF41-201ENST00000345093 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
RNF41-201ENST00000345093 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
RNF41-201ENST00000345093 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 YEATS2Q9ULM3 1422 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
RNF41-201ENST00000345093 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 MYO1BO43795 1136 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 IL2RBP14784 551 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
RNF41-201ENST00000345093 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 ACEP12821 1306 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 NF2P35240 595 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
RNF41-201ENST00000345093 ADGBQ8N7X0 1667 aa11.8□□□□□ -0.52
RNF41-201ENST00000345093 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
RNF41-201ENST00000345093 MPHOSPH6Q99547 160 aaKnown RBP11.8□□□□□ -0.52
RNF41-201ENST00000345093 PHF14O94880 888 aa11.8□□□□□ -0.52
RNF41-201ENST00000345093 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
RNF41-201ENST00000345093 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
RNF41-201ENST00000345093 KDM6BO15054 1643 aa11.79□□□□□ -0.52
RNF41-201ENST00000345093 LDHCP07864 332 aa11.79□□□□□ -0.52
RNF41-201ENST00000345093 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
RNF41-201ENST00000345093 PLIN1O60240 522 aa11.79□□□□□ -0.52
RNF41-201ENST00000345093 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms