RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 SSH1Q8WYL5 1049 aa20.21■□□□□ 0.83
EGFR-203ENST00000344576 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
EGFR-203ENST00000344576 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.21■□□□□ 0.83
EGFR-203ENST00000344576 NSD2O96028 1365 aa20.21■□□□□ 0.83
EGFR-203ENST00000344576 CCDC27Q2M243 656 aa20.2■□□□□ 0.83
EGFR-203ENST00000344576 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.83
EGFR-203ENST00000344576 NME9Q86XW9 330 aa20.2■□□□□ 0.82
EGFR-203ENST00000344576 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
EGFR-203ENST00000344576 SLIT1O75093 1534 aa20.2■□□□□ 0.82
EGFR-203ENST00000344576 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
EGFR-203ENST00000344576 FAM135BQ49AJ0 1406 aa20.2■□□□□ 0.82
EGFR-203ENST00000344576 TNPO1Q92973 898 aaKnown RBP20.2■□□□□ 0.82
EGFR-203ENST00000344576 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
EGFR-203ENST00000344576 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 DDIT3P35638 169 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
EGFR-203ENST00000344576 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 LNPKQ9C0E8 428 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 NCOA3Q9Y6Q9 1424 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 MED14O60244 1454 aa20.18■□□□□ 0.82
EGFR-203ENST00000344576 ESPNB1AK53 854 aa20.17■□□□□ 0.82
EGFR-203ENST00000344576 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
EGFR-203ENST00000344576 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
EGFR-203ENST00000344576 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
EGFR-203ENST00000344576 ATP7BP35670 1465 aa20.17■□□□□ 0.82
EGFR-203ENST00000344576 KIF20BQ96Q89 1820 aa20.17■□□□□ 0.82
EGFR-203ENST00000344576 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
EGFR-203ENST00000344576 HSP90AA1P07900 732 aaKnown RBP20.16■□□□□ 0.82
EGFR-203ENST00000344576 SMC5Q8IY18 1101 aa20.16■□□□□ 0.82
EGFR-203ENST00000344576 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
EGFR-203ENST00000344576 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
EGFR-203ENST00000344576 DDX19BQ9UMR2 479 aa20.15■□□□□ 0.82
EGFR-203ENST00000344576 CCDC61Q9Y6R9 512 aa20.15■□□□□ 0.82
EGFR-203ENST00000344576 HSP90AA2PQ14568 343 aaPredicted RBP20.14■□□□□ 0.82
EGFR-203ENST00000344576 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.82
EGFR-203ENST00000344576 CPSF1Q10570 1443 aaKnown RBP20.13■□□□□ 0.81
EGFR-203ENST00000344576 AK9Q5TCS8 1911 aa20.13■□□□□ 0.81
EGFR-203ENST00000344576 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
EGFR-203ENST00000344576 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
EGFR-203ENST00000344576 KCNA6P17658 529 aa20.13■□□□□ 0.81
EGFR-203ENST00000344576 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
EGFR-203ENST00000344576 RBM25P49756 843 aaKnown RBP20.12■□□□□ 0.81
EGFR-203ENST00000344576 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
EGFR-203ENST00000344576 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
EGFR-203ENST00000344576 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
EGFR-203ENST00000344576 ZBTB40Q9NUA8 1239 aa20.11■□□□□ 0.81
EGFR-203ENST00000344576 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
EGFR-203ENST00000344576 KIF2CQ99661 725 aa20.1■□□□□ 0.81
EGFR-203ENST00000344576 TBX22Q9Y458 520 aa20.1■□□□□ 0.81
EGFR-203ENST00000344576 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
EGFR-203ENST00000344576 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
EGFR-203ENST00000344576 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
EGFR-203ENST00000344576 SOX12O15370 315 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
EGFR-203ENST00000344576 NUCB1Q02818 461 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 TRIM44Q96DX7 344 aaPredicted RBP20.09■□□□□ 0.81
EGFR-203ENST00000344576 ACEP12821 1306 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 ADAMTSL3P82987 1691 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 SNX21Q969T3 373 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 POLKQ9UBT6 870 aa20.09■□□□□ 0.81
EGFR-203ENST00000344576 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
EGFR-203ENST00000344576 PKNOX2Q96KN3 472 aa20.08■□□□□ 0.8
EGFR-203ENST00000344576 C1orf115Q9H7X2 142 aa20.08■□□□□ 0.8
EGFR-203ENST00000344576 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
EGFR-203ENST00000344576 SSFA2P28290 1259 aa20.06■□□□□ 0.8
EGFR-203ENST00000344576 CHD1LQ86WJ1 897 aa20.06■□□□□ 0.8
EGFR-203ENST00000344576 GBP4Q96PP9 640 aa20.06■□□□□ 0.8
EGFR-203ENST00000344576 MON2Q7Z3U7 1717 aa20.06■□□□□ 0.8
EGFR-203ENST00000344576 RRP9O43818 475 aaKnown RBP20.05■□□□□ 0.8
EGFR-203ENST00000344576 GLIPR1L2Q4G1C9 344 aa20.05■□□□□ 0.8
EGFR-203ENST00000344576 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
EGFR-203ENST00000344576 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
EGFR-203ENST00000344576 ZMYND15Q9H091 742 aa20.05■□□□□ 0.8
EGFR-203ENST00000344576 RGPD8O14715 1765 aaPredicted RBP20.04■□□□□ 0.8
EGFR-203ENST00000344576 AKAP12Q02952 1782 aa20.04■□□□□ 0.8
EGFR-203ENST00000344576 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
EGFR-203ENST00000344576 HMOX1P09601 288 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 GAS2L2Q8NHY3 880 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 COG3Q96JB2 828 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 RIPK4P57078 832 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 DIP2AQ14689 1571 aa20.03■□□□□ 0.8
EGFR-203ENST00000344576 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
EGFR-203ENST00000344576 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
EGFR-203ENST00000344576 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.8
EGFR-203ENST00000344576 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
EGFR-203ENST00000344576 CIZ1Q9ULV3 898 aaPredicted RBP20.02■□□□□ 0.8
EGFR-203ENST00000344576 TBC1D9Q6ZT07 1266 aa20.01■□□□□ 0.79
EGFR-203ENST00000344576 TTC21BQ7Z4L5 1316 aa20.01■□□□□ 0.79
EGFR-203ENST00000344576 K7ELQ4 463 aaPredicted RBP20■□□□□ 0.79
EGFR-203ENST00000344576 BMP2KLQ5H9B9 411 aa20■□□□□ 0.79
EGFR-203ENST00000344576 PNPLA6Q8IY17 1366 aa19.99■□□□□ 0.79
EGFR-203ENST00000344576 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
EGFR-203ENST00000344576 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
EGFR-203ENST00000344576 USP6P35125 1406 aa19.98■□□□□ 0.79
EGFR-203ENST00000344576 ZNF142P52746 1687 aaPredicted RBP19.98■□□□□ 0.79
EGFR-203ENST00000344576 NUTM2GQ5VZR2 741 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms