RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 PKP1Q13835 747 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
KPNA1-201ENST00000344337 GNAI1P63096 354 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
KPNA1-201ENST00000344337 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 FAM193AP78312 1265 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 MNS1Q8NEH6 495 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 ADGRF5Q8IZF2 1346 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 CPLX1O14810 134 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
KPNA1-201ENST00000344337 TNMDQ9H2S6 317 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 PDCL2Q8N4E4 241 aa9.35□□□□□ -0.91
KPNA1-201ENST00000344337 TPM4P67936 248 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 VPS53Q5VIR6 699 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 ADCY5O95622 1261 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.91
KPNA1-201ENST00000344337 RABEP1Q15276 862 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 RIC3Q7Z5B4 369 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 ME1P48163 572 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 DAPK1P53355 1430 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 MAP3K1Q13233 1512 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 NFXL1Q6ZNB6 911 aa9.34□□□□□ -0.91
KPNA1-201ENST00000344337 RAPGEF3O95398 923 aa9.34□□□□□ -0.92
KPNA1-201ENST00000344337 LMOD3Q0VAK6 560 aa9.34□□□□□ -0.92
KPNA1-201ENST00000344337 FAM173BQ6P4H8 233 aa9.34□□□□□ -0.92
KPNA1-201ENST00000344337 GOLGA6L1Q8N7Z2 621 aa9.34□□□□□ -0.92
KPNA1-201ENST00000344337 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.92
KPNA1-201ENST00000344337 BOLA2Q9H3K6 86 aa9.34□□□□□ -0.92
KPNA1-201ENST00000344337 NLRP6P59044 892 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 PTPRGP23470 1445 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
KPNA1-201ENST00000344337 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
KPNA1-201ENST00000344337 SLC26A8Q96RN1 970 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
KPNA1-201ENST00000344337 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 NME9Q86XW9 330 aa9.33□□□□□ -0.92
KPNA1-201ENST00000344337 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
KPNA1-201ENST00000344337 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
KPNA1-201ENST00000344337 LRPPRCP42704 1394 aaKnown RBP9.32□□□□□ -0.92
KPNA1-201ENST00000344337 LRRCC1Q9C099 1032 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 NKTRP30414 1462 aaKnown RBP9.32□□□□□ -0.92
KPNA1-201ENST00000344337 C9orf84Q5VXU9 1444 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 SLC4A8Q2Y0W8 1093 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 MEIS3Q99687 375 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 RBSNQ9H1K0 784 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
KPNA1-201ENST00000344337 FYCO1Q9BQS8 1478 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 GNAI2P04899 355 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 NAP1L1P55209 391 aaKnown RBP9.31□□□□□ -0.92
KPNA1-201ENST00000344337 CCDC144CPQ8IYA2 1237 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 TRIM34Q9BYJ4 488 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 PTPN23Q9H3S7 1636 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 ERCC4Q92889 916 aaPredicted RBP9.31□□□□□ -0.92
KPNA1-201ENST00000344337 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 TPM3P06753 285 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 DNA2P51530 1060 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 CCDC112Q8NEF3 446 aa9.31□□□□□ -0.92
KPNA1-201ENST00000344337 FAM170AA1A519 330 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 ARHGEF11O15085 1522 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 AK9Q5TCS8 1911 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 SDSP20132 328 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
KPNA1-201ENST00000344337 CHST3Q7LGC8 479 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 CNTROBQ8N137 903 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 CLASRPQ8N2M8 674 aaKnown RBP9.3□□□□□ -0.92
KPNA1-201ENST00000344337 AACSQ86V21 672 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 LRRFIP2Q9Y608 721 aaKnown RBP9.3□□□□□ -0.92
KPNA1-201ENST00000344337 CPLX3Q8WVH0 158 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 PDCL3Q9H2J4 239 aa9.3□□□□□ -0.92
KPNA1-201ENST00000344337 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
KPNA1-201ENST00000344337 CLCN1P35523 988 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 SPATA32Q96LK8 384 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 SERPINC1P01008 464 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 SYNE3Q6ZMZ3 975 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 C8orf58Q8NAV2 365 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 ARHGAP5Q13017 1502 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 CD2BP2O95400 341 aaKnown RBP9.29□□□□□ -0.92
KPNA1-201ENST00000344337 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.922e-6■■■■□ 23.4
KPNA1-201ENST00000344337 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 KINO60870 393 aaKnown RBP9.29□□□□□ -0.92
KPNA1-201ENST00000344337 ABCC5O15440 1437 aa9.29□□□□□ -0.92
KPNA1-201ENST00000344337 MBD3O95983 291 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 KLHL10Q6JEL2 608 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 WDR63Q8IWG1 891 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 TNNT1P13805 278 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 USP48Q86UV5 1035 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 PDRG1Q9NUG6 133 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms