RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
PRDM2-203ENST00000343137 TMEM57Q8N5G2 664 aa10.07□□□□□ -0.8
PRDM2-203ENST00000343137 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
PRDM2-203ENST00000343137 GPATCH8Q9UKJ3 1502 aaKnown RBP10.07□□□□□ -0.8
PRDM2-203ENST00000343137 IL16Q14005 1332 aa10.07□□□□□ -0.8
PRDM2-203ENST00000343137 XBP1P17861 261 aa10.07□□□□□ -0.8
PRDM2-203ENST00000343137 RNF214Q8ND24 703 aa10.07□□□□□ -0.8
PRDM2-203ENST00000343137 CEP89Q96ST8 783 aa10.06□□□□□ -0.8
PRDM2-203ENST00000343137 HDGFL1Q5TGJ6 251 aa10.06□□□□□ -0.8
PRDM2-203ENST00000343137 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
PRDM2-203ENST00000343137 BRMS1Q9HCU9 246 aa10.06□□□□□ -0.8
PRDM2-203ENST00000343137 SDF4Q9BRK5 362 aa10.06□□□□□ -0.8
PRDM2-203ENST00000343137 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 ARHGEF12Q9NZN5 1544 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 KRT85P78386 507 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 PTPRKQ15262 1439 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 G3V3G9 751 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 ESPNB1AK53 854 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
PRDM2-203ENST00000343137 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 SART3Q15020 963 aaKnown RBP10.04□□□□□ -0.8
PRDM2-203ENST00000343137 C20orf194Q5TEA3 1177 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 KRT32Q14532 448 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 JMYQ8N9B5 988 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 DISP3Q9P2K9 1392 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
PRDM2-203ENST00000343137 AIMP1Q12904 312 aaKnown RBP10.03□□□□□ -0.8
PRDM2-203ENST00000343137 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 ADGRL1O94910 1474 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 TXNDC2Q86VQ3 553 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 FIBPO43427 364 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
PRDM2-203ENST00000343137 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
PRDM2-203ENST00000343137 ZSCAN30Q86W11 494 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
PRDM2-203ENST00000343137 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
PRDM2-203ENST00000343137 RRP9O43818 475 aaKnown RBP10.02□□□□□ -0.81
PRDM2-203ENST00000343137 VPS37DQ86XT2 251 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 TNMDQ9H2S6 317 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 ATF3P18847 181 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 NLRP2Q9NX02 1062 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.81
PRDM2-203ENST00000343137 AK7Q96M32 723 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 PRAG1Q86YV5 1406 aa10.02□□□□□ -0.81
PRDM2-203ENST00000343137 PTPRCP08575 1304 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
PRDM2-203ENST00000343137 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 BMP2KLQ5H9B9 411 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.01□□□□□ -0.81
PRDM2-203ENST00000343137 STK38Q15208 465 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 HSP90B2PQ58FF3 399 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
PRDM2-203ENST00000343137 CCDC158Q5M9N0 1113 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
PRDM2-203ENST00000343137 TATP17735 454 aaPredicted RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 FILIP1LQ4L180 1135 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 LARP1BQ659C4 914 aaKnown RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 SMARCE1Q969G3 411 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 DNAJC2Q99543 621 aaKnown RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 CCDC66A2RUB6 948 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 CDR1P51861 262 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 C14orf93Q9H972 538 aaKnown RBP10□□□□□ -0.81
PRDM2-203ENST00000343137 INSRP06213 1382 aa10□□□□□ -0.81
PRDM2-203ENST00000343137 GNAT3A8MTJ3 354 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 MX1P20591 662 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
PRDM2-203ENST00000343137 SMC2O95347 1197 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 FOSBP53539 338 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
PRDM2-203ENST00000343137 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 ARHGAP45Q92619 1136 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 NUP62CLQ9H1M0 184 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
PRDM2-203ENST00000343137 WDR62O43379 1518 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 SPG7Q9UQ90 795 aa9.99□□□□□ -0.81
PRDM2-203ENST00000343137 GLRX3O76003 335 aaKnown RBP9.99□□□□□ -0.81
PRDM2-203ENST00000343137 ZNF530Q6P9A1 599 aaPredicted RBP9.99□□□□□ -0.81
PRDM2-203ENST00000343137 PUS7Q96PZ0 661 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms