RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CUL7Q14999 1698 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 FYB1O15117 783 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 VPS37DQ86XT2 251 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 SLC52A1Q9NWF4 448 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 PSMA5P28066 241 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 CCT4P50991 539 aaKnown RBP9.66□□□□□ -0.86
UBE4B-202ENST00000343090 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
UBE4B-202ENST00000343090 EXOC6BQ9Y2D4 811 aa9.66□□□□□ -0.86
UBE4B-202ENST00000343090 ATF3P18847 181 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
UBE4B-202ENST00000343090 PLEKHO1Q53GL0 409 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-202ENST00000343090 TAF3Q5VWG9 929 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 MBD3O95983 291 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 SPC24Q8NBT2 197 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 SDF4Q9BRK5 362 aa9.65□□□□□ -0.86
UBE4B-202ENST00000343090 IGHDP01880 384 aa9.65□□□□□ -0.87
UBE4B-202ENST00000343090 SRCIN1Q9C0H9 1055 aa9.65□□□□□ -0.87
UBE4B-202ENST00000343090 MYL6BP14649 208 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 PCMTD1Q96MG8 357 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 ZNF692Q9BU19 519 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 ZNF530Q6P9A1 599 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 TRIM5Q9C035 493 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 CGNQ9P2M7 1197 aaKnown RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 TPM1P09493 284 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 NUDT16Q96DE0 195 aaKnown RBP9.64□□□□□ -0.87
UBE4B-202ENST00000343090 FMNL2Q96PY5 1086 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 MCM2P49736 904 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 TEX35Q5T0J7 233 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 NME9Q86XW9 330 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
UBE4B-202ENST00000343090 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
UBE4B-202ENST00000343090 ATP2B1P20020 1258 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 CWC27Q6UX04 472 aaKnown RBP9.63□□□□□ -0.87
UBE4B-202ENST00000343090 PDCL2Q8N4E4 241 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 ERICH2A1L162 156 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 C8orf34Q49A92 452 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
UBE4B-202ENST00000343090 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
UBE4B-202ENST00000343090 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
UBE4B-202ENST00000343090 DYNC1I1O14576 645 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 KIF14Q15058 1648 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 TRIM27P14373 513 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
UBE4B-202ENST00000343090 CYP46A1Q9Y6A2 500 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 FBLN1P23142 703 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 CIZ1Q9ULV3 898 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-202ENST00000343090 F6X3S4 739 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 AACSQ86V21 672 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 STK11IPQ8N1F8 1099 aa9.62□□□□□ -0.87
UBE4B-202ENST00000343090 GRIN2AQ12879 1464 aa9.61□□□□□ -0.87
UBE4B-202ENST00000343090 SAFBQ15424 915 aaKnown RBP eCLIP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 PDILTQ8N807 584 aa9.61□□□□□ -0.87
UBE4B-202ENST00000343090 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
UBE4B-202ENST00000343090 ERC1Q8IUD2 1116 aa9.61□□□□□ -0.87
UBE4B-202ENST00000343090 NOL10Q9BSC4 688 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 RPAP2Q8IXW5 612 aaPredicted RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
UBE4B-202ENST00000343090 HOOK1Q9UJC3 728 aaKnown RBP9.61□□□□□ -0.87
UBE4B-202ENST00000343090 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 RRP12Q5JTH9 1297 aaKnown RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 SMC2O95347 1197 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 AMOTL1Q8IY63 956 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
UBE4B-202ENST00000343090 SMAP1Q8IYB5 467 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-202ENST00000343090 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 LETM1O95202 739 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-202ENST00000343090 PDCP20941 246 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
UBE4B-202ENST00000343090 HIP1O00291 1037 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 NOS1P29475 1434 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 SYCE3A1L190 88 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 OFD1O75665 1012 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 NAT10Q9H0A0 1025 aaKnown RBP9.59□□□□□ -0.87
UBE4B-202ENST00000343090 PDRG1Q9NUG6 133 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 TATP17735 454 aaPredicted RBP9.59□□□□□ -0.87
UBE4B-202ENST00000343090 SSFA2P28290 1259 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 GPS2Q13227 327 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 MNS1Q8NEH6 495 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 ANKRD20A12PQ8NF67 263 aa9.59□□□□□ -0.87
UBE4B-202ENST00000343090 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms