RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 CDC42BPGQ6DT37 1551 aa30.08■■■□□ 2.41
NELFB-201ENST00000343053 CD2BP2O95400 341 aaKnown RBP30.08■■■□□ 2.41
NELFB-201ENST00000343053 RBM42Q9BTD8 480 aaKnown RBP30.08■■■□□ 2.41
NELFB-201ENST00000343053 TRAK2O60296 914 aa30.08■■■□□ 2.41
NELFB-201ENST00000343053 GNAI1P63096 354 aa30.08■■■□□ 2.41
NELFB-201ENST00000343053 KRT24Q2M2I5 525 aa30.07■■■□□ 2.4
NELFB-201ENST00000343053 NUTM2FA1L443 756 aa30.06■■■□□ 2.4
NELFB-201ENST00000343053 TSPOAP1O95153 1857 aa30.06■■■□□ 2.4
NELFB-201ENST00000343053 HSP90AB1P08238 724 aaKnown RBP30.06■■■□□ 2.4
NELFB-201ENST00000343053 ZNF692Q9BU19 519 aaPredicted RBP30.06■■■□□ 2.4
NELFB-201ENST00000343053 RIMS2Q9UQ26 1411 aa30.06■■■□□ 2.4
NELFB-201ENST00000343053 FAM69CQ0P6D2 419 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 IFT57Q9NWB7 429 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 DLG5Q8TDM6 1919 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 ATP7BP35670 1465 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 XRCC6P12956 609 aaKnown RBP eCLIP30.05■■■□□ 2.4
NELFB-201ENST00000343053 RBM25P49756 843 aaKnown RBP30.05■■■□□ 2.4
NELFB-201ENST00000343053 BMP2KLQ5H9B9 411 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 TBC1D9Q6ZT07 1266 aa30.05■■■□□ 2.4
NELFB-201ENST00000343053 GOLGA6L3A6NEY3 463 aa30.04■■■□□ 2.4
NELFB-201ENST00000343053 WASLO00401 505 aaPredicted RBP30.04■■■□□ 2.4
NELFB-201ENST00000343053 L1TD1Q5T7N2 865 aaKnown RBP30.04■■■□□ 2.4
NELFB-201ENST00000343053 AEBP1Q8IUX7 1158 aa30.04■■■□□ 2.4
NELFB-201ENST00000343053 A2ML1A8K2U0 1454 aa30.04■■■□□ 2.4
NELFB-201ENST00000343053 SOX12O15370 315 aa30.03■■■□□ 2.4
NELFB-201ENST00000343053 COG3Q96JB2 828 aa30.03■■■□□ 2.4
NELFB-201ENST00000343053 METP08581 1390 aa30.02■■■□□ 2.4
NELFB-201ENST00000343053 PTCH1Q13635 1447 aa30.02■■■□□ 2.4
NELFB-201ENST00000343053 NUDT16Q96DE0 195 aaKnown RBP30.02■■■□□ 2.4
NELFB-201ENST00000343053 APBB1O00213 710 aa30.01■■■□□ 2.4
NELFB-201ENST00000343053 EIF5BO60841 1220 aaKnown RBP30.01■■■□□ 2.4
NELFB-201ENST00000343053 HSP90AA1P07900 732 aaKnown RBP30.01■■■□□ 2.4
NELFB-201ENST00000343053 FAM43AQ8N2R8 423 aa30.01■■■□□ 2.4
NELFB-201ENST00000343053 CPS1P31327 1500 aa30.01■■■□□ 2.39
NELFB-201ENST00000343053 GCC1Q96CN9 775 aa30.01■■■□□ 2.39
NELFB-201ENST00000343053 KIF2CQ99661 725 aa30.01■■■□□ 2.39
NELFB-201ENST00000343053 ABCC4O15439 1325 aa30■■■□□ 2.39
NELFB-201ENST00000343053 RRAGDQ9NQL2 400 aaPredicted RBP30■■■□□ 2.39
NELFB-201ENST00000343053 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
NELFB-201ENST00000343053 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
NELFB-201ENST00000343053 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
NELFB-201ENST00000343053 ZNF853P0CG23 659 aa30■■■□□ 2.39
NELFB-201ENST00000343053 CALD1Q05682 793 aaKnown RBP30■■■□□ 2.39
NELFB-201ENST00000343053 EDC4Q6P2E9 1401 aaKnown RBP29.99■■■□□ 2.39
NELFB-201ENST00000343053 BRPF1P55201 1214 aaPredicted RBP29.99■■■□□ 2.39
NELFB-201ENST00000343053 ZNF428Q96B54 188 aa29.99■■■□□ 2.39
NELFB-201ENST00000343053 CFAP44Q96MT7 982 aa29.99■■■□□ 2.39
NELFB-201ENST00000343053 TNPO1Q92973 898 aaKnown RBP29.98■■■□□ 2.39
NELFB-201ENST00000343053 C16orf71Q8IYS4 520 aaPredicted RBP29.97■■■□□ 2.39
NELFB-201ENST00000343053 CPSF1Q10570 1443 aaKnown RBP29.96■■■□□ 2.39
NELFB-201ENST00000343053 ARHGAP45Q92619 1136 aa29.96■■■□□ 2.39
NELFB-201ENST00000343053 CDK12Q9NYV4 1490 aaPredicted RBP29.95■■■□□ 2.39
NELFB-201ENST00000343053 SETD1AO15047 1707 aaKnown RBP29.95■■■□□ 2.39
NELFB-201ENST00000343053 PIK3R4Q99570 1358 aa29.95■■■□□ 2.38
NELFB-201ENST00000343053 GSPT1P15170 499 aaKnown RBP29.95■■■□□ 2.38
NELFB-201ENST00000343053 MCM10Q7L590 875 aa29.95■■■□□ 2.38
NELFB-201ENST00000343053 SULT6B1Q6IMI4 303 aa29.94■■■□□ 2.38
NELFB-201ENST00000343053 NCOA3Q9Y6Q9 1424 aa29.94■■■□□ 2.38
NELFB-201ENST00000343053 FSD2A1L4K1 749 aa29.93■■■□□ 2.38
NELFB-201ENST00000343053 DDIT3P35638 169 aa29.93■■■□□ 2.38
NELFB-201ENST00000343053 OTUD7AQ8TE49 926 aaPredicted RBP29.93■■■□□ 2.38
NELFB-201ENST00000343053 KNDC1Q76NI1 1749 aa29.93■■■□□ 2.38
NELFB-201ENST00000343053 SNX21Q969T3 373 aa29.92■■■□□ 2.38
NELFB-201ENST00000343053 DLC1Q96QB1 1528 aa29.92■■■□□ 2.38
NELFB-201ENST00000343053 CCDC61Q9Y6R9 512 aa29.91■■■□□ 2.38
NELFB-201ENST00000343053 API5Q9BZZ5 524 aaKnown RBP29.9■■■□□ 2.38
NELFB-201ENST00000343053 PRR36Q9H6K5 1346 aa29.9■■■□□ 2.38
NELFB-201ENST00000343053 DDX11L8A8MPP1 907 aa29.89■■■□□ 2.38
NELFB-201ENST00000343053 LMOD3Q0VAK6 560 aa29.89■■■□□ 2.38
NELFB-201ENST00000343053 CHMP4BQ9H444 224 aaKnown RBP29.89■■■□□ 2.38
NELFB-201ENST00000343053 MIS18AQ9NYP9 233 aa29.89■■■□□ 2.38
NELFB-201ENST00000343053 AK9Q5TCS8 1911 aa29.89■■■□□ 2.37
NELFB-201ENST00000343053 SMARCA5O60264 1052 aaPredicted RBP29.89■■■□□ 2.37
NELFB-201ENST00000343053 EIF4A2Q14240 407 aaKnown RBP29.88■■■□□ 2.37
NELFB-201ENST00000343053 GAS2L2Q8NHY3 880 aa29.88■■■□□ 2.37
NELFB-201ENST00000343053 NRXN3Q9Y4C0 1643 aa29.87■■■□□ 2.37
NELFB-201ENST00000343053 PLEKHM2Q8IWE5 1019 aa29.87■■■□□ 2.37
NELFB-201ENST00000343053 CDC45O75419 566 aa29.87■■■□□ 2.37
NELFB-201ENST00000343053 K7ELQ4 463 aaPredicted RBP29.86■■■□□ 2.37
NELFB-201ENST00000343053 SSFA2P28290 1259 aa29.84■■■□□ 2.37
NELFB-201ENST00000343053 AATKQ6ZMQ8 1374 aa29.84■■■□□ 2.37
NELFB-201ENST00000343053 HSP90AB2PQ58FF8 381 aa29.83■■■□□ 2.37
NELFB-201ENST00000343053 MSH6P52701 1360 aa29.83■■■□□ 2.37
NELFB-201ENST00000343053 RAB3GAP1Q15042 981 aa29.83■■■□□ 2.37
NELFB-201ENST00000343053 SPATA31D1Q6ZQQ2 1576 aa29.82■■■□□ 2.36
NELFB-201ENST00000343053 MEIS3Q99687 375 aa29.81■■■□□ 2.36
NELFB-201ENST00000343053 GRPEL1Q9HAV7 217 aa29.8■■■□□ 2.36
NELFB-201ENST00000343053 GBP4Q96PP9 640 aa29.8■■■□□ 2.36
NELFB-201ENST00000343053 MON2Q7Z3U7 1717 aa29.8■■■□□ 2.36
NELFB-201ENST00000343053 FOXO3O43524 673 aa29.79■■■□□ 2.36
NELFB-201ENST00000343053 ESF1Q9H501 851 aaKnown RBP29.79■■■□□ 2.36
NELFB-201ENST00000343053 DCTPP1Q9H773 170 aa29.79■■■□□ 2.36
NELFB-201ENST00000343053 GAS2L3Q86XJ1 694 aa29.79■■■□□ 2.36
NELFB-201ENST00000343053 TTC22Q5TAA0 569 aa29.79■■■□□ 2.36
NELFB-201ENST00000343053 ITSN1Q15811 1721 aa29.78■■■□□ 2.36
NELFB-201ENST00000343053 SLC4A10Q6U841 1118 aa29.78■■■□□ 2.36
NELFB-201ENST00000343053 ATP10DQ9P241 1426 aa29.77■■■□□ 2.36
NELFB-201ENST00000343053 MRE11P49959 708 aa29.77■■■□□ 2.36
NELFB-201ENST00000343053 CEP85Q6P2H3 762 aa29.77■■■□□ 2.36
NELFB-201ENST00000343053 C3P01024 1663 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms