RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 FAM161AQ3B820 660 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 OVOS2A0A0G2JMS6 1433 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 ARHGEF10O15013 1369 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 KIAA0232Q92628 1395 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 CICQ96RK0 1608 aaPredicted RBP10.57□□□□□ -0.72
CFAP54-201ENST00000342887 KIF16BQ96L93 1317 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 WNK3Q9BYP7 1800 aa10.57□□□□□ -0.72
CFAP54-201ENST00000342887 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
CFAP54-201ENST00000342887 ARHGAP45Q92619 1136 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 FCHSD2O94868 740 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 PRAM1Q96QH2 718 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 GGT6Q6P531 493 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 COL22A1Q8NFW1 1626 aaPredicted RBP10.56□□□□□ -0.72
CFAP54-201ENST00000342887 MRC1P22897 1456 aa10.56□□□□□ -0.72
CFAP54-201ENST00000342887 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
CFAP54-201ENST00000342887 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
CFAP54-201ENST00000342887 SKAP1Q86WV1 359 aa10.55□□□□□ -0.72
CFAP54-201ENST00000342887 ZNF692Q9BU19 519 aaPredicted RBP10.55□□□□□ -0.72
CFAP54-201ENST00000342887 CDK19Q9BWU1 502 aa10.55□□□□□ -0.72
CFAP54-201ENST00000342887 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
CFAP54-201ENST00000342887 MORC1Q86VD1 984 aa10.54□□□□□ -0.72
CFAP54-201ENST00000342887 MAPK8IP3Q9UPT6 1336 aa10.54□□□□□ -0.72
CFAP54-201ENST00000342887 AK9Q5TCS8 1911 aa10.54□□□□□ -0.72
CFAP54-201ENST00000342887 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.72
CFAP54-201ENST00000342887 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.72
CFAP54-201ENST00000342887 TJP1Q07157 1748 aa10.52□□□□□ -0.73
CFAP54-201ENST00000342887 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.52□□□□□ -0.73
CFAP54-201ENST00000342887 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
CFAP54-201ENST00000342887 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.73
CFAP54-201ENST00000342887 TRIM27P14373 513 aa10.51□□□□□ -0.73
CFAP54-201ENST00000342887 SEC24BO95487 1268 aa10.51□□□□□ -0.73
CFAP54-201ENST00000342887 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
CFAP54-201ENST00000342887 NBR1Q14596 966 aa10.5□□□□□ -0.73
CFAP54-201ENST00000342887 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
CFAP54-201ENST00000342887 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
CFAP54-201ENST00000342887 IFT57Q9NWB7 429 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 VAMP4O75379 141 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 KIF2CQ99661 725 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 PLCH1Q4KWH8 1693 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
CFAP54-201ENST00000342887 HEG1Q9ULI3 1381 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 MSH6P52701 1360 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
CFAP54-201ENST00000342887 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
CFAP54-201ENST00000342887 CEMIPQ8WUJ3 1361 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
CFAP54-201ENST00000342887 NFE2L2Q16236 605 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 PANK1Q8TE04 598 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 NUCB1Q02818 461 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 ARFGEF2Q9Y6D5 1785 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 RREB1Q92766 1687 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 PHACTR3Q96KR7 559 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 MYH15Q9Y2K3 1946 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
CFAP54-201ENST00000342887 CLEC17AQ6ZS10 378 aa10.46□□□□□ -0.73
CFAP54-201ENST00000342887 LTKP29376 864 aa10.46□□□□□ -0.73
CFAP54-201ENST00000342887 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.73
CFAP54-201ENST00000342887 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.74
CFAP54-201ENST00000342887 SETD1BQ9UPS6 1966 aaKnown RBP10.46□□□□□ -0.74
CFAP54-201ENST00000342887 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
CFAP54-201ENST00000342887 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
CFAP54-201ENST00000342887 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
CFAP54-201ENST00000342887 CFAP53Q96M91 514 aa10.45□□□□□ -0.74
CFAP54-201ENST00000342887 DIAPH1O60610 1272 aaKnown RBP10.44□□□□□ -0.74
CFAP54-201ENST00000342887 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 CASZ1Q86V15 1759 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 GGNBP2Q9H3C7 697 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 TTC21BQ7Z4L5 1316 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 CHL1O00533 1208 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
CFAP54-201ENST00000342887 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
CFAP54-201ENST00000342887 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
CFAP54-201ENST00000342887 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
CFAP54-201ENST00000342887 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
CFAP54-201ENST00000342887 SOS1Q07889 1333 aaPredicted RBP10.43□□□□□ -0.74
CFAP54-201ENST00000342887 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
CFAP54-201ENST00000342887 TMEM94Q12767 1356 aa10.43□□□□□ -0.74
CFAP54-201ENST00000342887 ZKSCAN2Q63HK3 967 aa10.43□□□□□ -0.74
CFAP54-201ENST00000342887 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
CFAP54-201ENST00000342887 NUDT16Q96DE0 195 aaKnown RBP10.42□□□□□ -0.74
CFAP54-201ENST00000342887 CCDC61Q9Y6R9 512 aa10.42□□□□□ -0.74
CFAP54-201ENST00000342887 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
CFAP54-201ENST00000342887 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
CFAP54-201ENST00000342887 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
CFAP54-201ENST00000342887 SNX21Q969T3 373 aa10.42□□□□□ -0.74
CFAP54-201ENST00000342887 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
CFAP54-201ENST00000342887 HDGFL2Q7Z4V5 671 aaPredicted RBP10.4□□□□□ -0.74
CFAP54-201ENST00000342887 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
CFAP54-201ENST00000342887 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms