RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 RNF217Q8TC41 542 aa21.15■□□□□ 0.98
CDK11B-201ENST00000340677 GOLIM4O00461 696 aa21.14■□□□□ 0.98
CDK11B-201ENST00000340677 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.98
CDK11B-201ENST00000340677 SIRT1Q96EB6 747 aa21.14■□□□□ 0.98
CDK11B-201ENST00000340677 CAPN2P17655 700 aa21.13■□□□□ 0.97
CDK11B-201ENST00000340677 NRXN3Q9Y4C0 1643 aa21.13■□□□□ 0.97
CDK11B-201ENST00000340677 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
CDK11B-201ENST00000340677 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
CDK11B-201ENST00000340677 TTC36A6NLP5 189 aa21.12■□□□□ 0.97
CDK11B-201ENST00000340677 MAFGO15525 162 aa21.12■□□□□ 0.97
CDK11B-201ENST00000340677 SATB1Q01826 763 aa21.12■□□□□ 0.97
CDK11B-201ENST00000340677 MYOM1P52179 1685 aa21.12■□□□□ 0.97
CDK11B-201ENST00000340677 ZBED9Q6R2W3 1325 aa21.12■□□□□ 0.97
CDK11B-201ENST00000340677 FAM9BQ8IZU0 186 aa21.11■□□□□ 0.97
CDK11B-201ENST00000340677 DLC1Q96QB1 1528 aa21.11■□□□□ 0.97
CDK11B-201ENST00000340677 MAP2K1Q02750 393 aaPredicted RBP21.11■□□□□ 0.97
CDK11B-201ENST00000340677 SLIT1O75093 1534 aa21.1■□□□□ 0.97
CDK11B-201ENST00000340677 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
CDK11B-201ENST00000340677 FBXO41Q8TF61 875 aa21.1■□□□□ 0.97
CDK11B-201ENST00000340677 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
CDK11B-201ENST00000340677 MRE11P49959 708 aa21.09■□□□□ 0.97
CDK11B-201ENST00000340677 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
CDK11B-201ENST00000340677 CEP83Q9Y592 693 aa21.09■□□□□ 0.97
CDK11B-201ENST00000340677 ARHGAP23Q9P227 1491 aa21.08■□□□□ 0.97
CDK11B-201ENST00000340677 TULP2O00295 520 aa21.07■□□□□ 0.96
CDK11B-201ENST00000340677 MS4A1P11836 297 aa21.07■□□□□ 0.96
CDK11B-201ENST00000340677 ZNF142P52746 1687 aaPredicted RBP21.07■□□□□ 0.96
CDK11B-201ENST00000340677 YTHDC2Q9H6S0 1430 aaKnown RBP21.06■□□□□ 0.96
CDK11B-201ENST00000340677 EFCC1Q9HA90 598 aa21.06■□□□□ 0.96
CDK11B-201ENST00000340677 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
CDK11B-201ENST00000340677 PTPRMP28827 1452 aa21.05■□□□□ 0.96
CDK11B-201ENST00000340677 ZNF771Q7L3S4 317 aaPredicted RBP21.05■□□□□ 0.96
CDK11B-201ENST00000340677 NUTM2DQ5VT03 806 aaPredicted RBP21.04■□□□□ 0.96
CDK11B-201ENST00000340677 ATP2B3Q16720 1220 aa21.04■□□□□ 0.96
CDK11B-201ENST00000340677 NBPF9Q3BBW0 867 aa21.03■□□□□ 0.96
CDK11B-201ENST00000340677 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
CDK11B-201ENST00000340677 MYCBPQ99417 103 aaPredicted RBP21.02■□□□□ 0.96
CDK11B-201ENST00000340677 MRS2Q9HD23 443 aa21.02■□□□□ 0.96
CDK11B-201ENST00000340677 TRAK1Q9UPV9 953 aa21.02■□□□□ 0.96
CDK11B-201ENST00000340677 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
CDK11B-201ENST00000340677 TIGD1Q96MW7 591 aa21.02■□□□□ 0.95
CDK11B-201ENST00000340677 CEP170BQ9Y4F5 1589 aaPredicted RBP21.01■□□□□ 0.95
CDK11B-201ENST00000340677 PLEKHG1Q9ULL1 1385 aa21.01■□□□□ 0.95
CDK11B-201ENST00000340677 PER1O15534 1290 aaPredicted RBP21.01■□□□□ 0.95
CDK11B-201ENST00000340677 BRPF1P55201 1214 aaPredicted RBP21.01■□□□□ 0.95
CDK11B-201ENST00000340677 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
CDK11B-201ENST00000340677 RAI14Q9P0K7 980 aa21■□□□□ 0.95
CDK11B-201ENST00000340677 SGSM3Q96HU1 749 aa21■□□□□ 0.95
CDK11B-201ENST00000340677 ZBTB12Q9Y330 459 aaPredicted RBP21■□□□□ 0.95
CDK11B-201ENST00000340677 ABCC11Q96J66 1382 aa21■□□□□ 0.95
CDK11B-201ENST00000340677 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
CDK11B-201ENST00000340677 TSPYL1Q9H0U9 437 aa20.99■□□□□ 0.95
CDK11B-201ENST00000340677 TECPR2O15040 1411 aa20.99■□□□□ 0.95
CDK11B-201ENST00000340677 CCDC172P0C7W6 258 aa20.99■□□□□ 0.95
CDK11B-201ENST00000340677 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
CDK11B-201ENST00000340677 ZSCAN30Q86W11 494 aa20.98■□□□□ 0.95
CDK11B-201ENST00000340677 GRPEL1Q9HAV7 217 aa20.98■□□□□ 0.95
CDK11B-201ENST00000340677 CPS1P31327 1500 aa20.97■□□□□ 0.95
CDK11B-201ENST00000340677 MED14O60244 1454 aa20.97■□□□□ 0.95
CDK11B-201ENST00000340677 NPC1L1Q9UHC9 1359 aa20.97■□□□□ 0.95
CDK11B-201ENST00000340677 BORCS6Q96GS4 357 aa20.97■□□□□ 0.95
CDK11B-201ENST00000340677 THEMISQ8N1K5 641 aaPredicted RBP20.96■□□□□ 0.95
CDK11B-201ENST00000340677 OTUD6BQ8N6M0 293 aa20.96■□□□□ 0.95
CDK11B-201ENST00000340677 PARD3Q8TEW0 1356 aa20.96■□□□□ 0.95
CDK11B-201ENST00000340677 NCAPGQ9BPX3 1015 aa20.96■□□□□ 0.95
CDK11B-201ENST00000340677 SMC4Q9NTJ3 1288 aa20.96■□□□□ 0.95
CDK11B-201ENST00000340677 PANK3Q9H999 370 aa20.95■□□□□ 0.94
CDK11B-201ENST00000340677 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
CDK11B-201ENST00000340677 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.94
CDK11B-201ENST00000340677 NBPF10Q6P3W6 841 aaKnown RBP20.95■□□□□ 0.94
CDK11B-201ENST00000340677 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
CDK11B-201ENST00000340677 CCDC66A2RUB6 948 aa20.94■□□□□ 0.94
CDK11B-201ENST00000340677 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
CDK11B-201ENST00000340677 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
CDK11B-201ENST00000340677 NINLQ9Y2I6 1382 aa20.93■□□□□ 0.94
CDK11B-201ENST00000340677 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
CDK11B-201ENST00000340677 ZNF513Q8N8E2 541 aaPredicted RBP20.93■□□□□ 0.94
CDK11B-201ENST00000340677 KIF3AQ9Y496 699 aa20.93■□□□□ 0.94
CDK11B-201ENST00000340677 ARID4AP29374 1257 aaPredicted RBP20.92■□□□□ 0.94
CDK11B-201ENST00000340677 GZF1Q9H116 711 aaPredicted RBP20.91■□□□□ 0.94
CDK11B-201ENST00000340677 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
CDK11B-201ENST00000340677 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
CDK11B-201ENST00000340677 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
CDK11B-201ENST00000340677 MSNP26038 577 aaKnown RBP20.89■□□□□ 0.94
CDK11B-201ENST00000340677 GTF2A1P52655 376 aaPredicted RBP20.89■□□□□ 0.93
CDK11B-201ENST00000340677 METP08581 1390 aa20.89■□□□□ 0.93
CDK11B-201ENST00000340677 LTKP29376 864 aa20.88■□□□□ 0.93
CDK11B-201ENST00000340677 TXNDC2Q86VQ3 553 aa20.88■□□□□ 0.93
CDK11B-201ENST00000340677 TMTC2Q8N394 836 aa20.88■□□□□ 0.93
CDK11B-201ENST00000340677 ATAD2Q6PL18 1390 aa20.87■□□□□ 0.93
CDK11B-201ENST00000340677 CCDC27Q2M243 656 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 NBPF6Q5VWK0 638 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
CDK11B-201ENST00000340677 CALR3Q96L12 384 aaKnown RBP20.86■□□□□ 0.93
CDK11B-201ENST00000340677 NBPF4Q96M43 638 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 PRAM1Q96QH2 718 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 FEZ2Q9UHY8 353 aaPredicted RBP20.86■□□□□ 0.93
CDK11B-201ENST00000340677 ADGRB2O60241 1585 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 KNSTRNQ9Y448 316 aa20.86■□□□□ 0.93
CDK11B-201ENST00000340677 SASS6Q6UVJ0 657 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms