RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
PDE4D-203ENST00000340635 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
PDE4D-203ENST00000340635 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
PDE4D-203ENST00000340635 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
PDE4D-203ENST00000340635 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
PDE4D-203ENST00000340635 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
PDE4D-203ENST00000340635 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
PDE4D-203ENST00000340635 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
PDE4D-203ENST00000340635 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
PDE4D-203ENST00000340635 MCM2P49736 904 aa16.31■□□□□ 0.2
PDE4D-203ENST00000340635 IFFO1Q0D2I5 559 aa16.31■□□□□ 0.2
PDE4D-203ENST00000340635 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
PDE4D-203ENST00000340635 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
PDE4D-203ENST00000340635 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
PDE4D-203ENST00000340635 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
PDE4D-203ENST00000340635 CCDC158Q5M9N0 1113 aa16.3■□□□□ 0.2
PDE4D-203ENST00000340635 PPP4R3AQ6IN85 833 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 CEP57L1Q8IYX8 460 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 MAP9Q49MG5 647 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 AAMPQ13685 434 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
PDE4D-203ENST00000340635 CTNNBL1Q8WYA6 563 aaPredicted RBP16.28■□□□□ 0.2
PDE4D-203ENST00000340635 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 PDCL2Q8N4E4 241 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 ANKRD1Q15327 319 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 UQCRHLA0A096LP55 91 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 UQCRHP07919 91 aa16.28■□□□□ 0.2
PDE4D-203ENST00000340635 SF3B2Q13435 895 aaKnown RBP16.28■□□□□ 0.2
PDE4D-203ENST00000340635 IMMTQ16891 758 aaKnown RBP16.28■□□□□ 0.2
PDE4D-203ENST00000340635 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
PDE4D-203ENST00000340635 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
PDE4D-203ENST00000340635 GNAI1P63096 354 aa16.27■□□□□ 0.2
PDE4D-203ENST00000340635 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.19
PDE4D-203ENST00000340635 MICALCLQ6ZW33 695 aa16.27■□□□□ 0.19
PDE4D-203ENST00000340635 NEK4P51957 841 aa16.27■□□□□ 0.19
PDE4D-203ENST00000340635 TIGD1Q96MW7 591 aa16.27■□□□□ 0.19
PDE4D-203ENST00000340635 TNIP1Q15025 636 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
PDE4D-203ENST00000340635 STK3Q13188 491 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 CHMP4BP1P59074 171 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 MCM3P25205 808 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 SPA17Q15506 151 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
PDE4D-203ENST00000340635 MRPS9P82933 396 aaKnown RBP16.25■□□□□ 0.19
PDE4D-203ENST00000340635 CTNNA2P26232 953 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 RNF187Q5TA31 235 aaPredicted RBP16.25■□□□□ 0.19
PDE4D-203ENST00000340635 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
PDE4D-203ENST00000340635 TSNARE1Q96NA8 513 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 CDKL5O76039 1030 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 C6orf163Q5TEZ5 329 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 DAAM2Q86T65 1068 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 LUZP1Q86V48 1076 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 TMCO5BA8MYB1 307 aa16.25■□□□□ 0.19
PDE4D-203ENST00000340635 ATF3P18847 181 aa16.24■□□□□ 0.19
PDE4D-203ENST00000340635 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
PDE4D-203ENST00000340635 APAF1O14727 1248 aa16.24■□□□□ 0.19
PDE4D-203ENST00000340635 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
PDE4D-203ENST00000340635 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 RAB3IL1Q8TBN0 382 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 UBXN4Q92575 508 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 SURF6O75683 361 aaKnown RBP16.23■□□□□ 0.19
PDE4D-203ENST00000340635 FMN1Q68DA7 1419 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
PDE4D-203ENST00000340635 RBM25P49756 843 aaKnown RBP16.22■□□□□ 0.19
PDE4D-203ENST00000340635 KRT85P78386 507 aa16.22■□□□□ 0.19
PDE4D-203ENST00000340635 GPATCH11Q8N954 259 aa16.22■□□□□ 0.19
PDE4D-203ENST00000340635 FAM107BQ9H098 131 aa16.22■□□□□ 0.19
PDE4D-203ENST00000340635 CASQ1P31415 396 aa16.22■□□□□ 0.19
PDE4D-203ENST00000340635 USP5P45974 858 aa16.22■□□□□ 0.19
PDE4D-203ENST00000340635 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
PDE4D-203ENST00000340635 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
PDE4D-203ENST00000340635 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
PDE4D-203ENST00000340635 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.18
PDE4D-203ENST00000340635 HMOX1P09601 288 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
PDE4D-203ENST00000340635 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■□□ 14.7
PDE4D-203ENST00000340635 TSG101Q99816 390 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 SREK1Q8WXA9 508 aaKnown RBP16.2■□□□□ 0.18
PDE4D-203ENST00000340635 FERMT1Q9BQL6 677 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
PDE4D-203ENST00000340635 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
PDE4D-203ENST00000340635 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 IPO4Q8TEX9 1081 aaKnown RBP16.19■□□□□ 0.18
PDE4D-203ENST00000340635 CEP131Q9UPN4 1083 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 CALCOCO1Q9P1Z2 691 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 PPP1R14CQ8TAE6 165 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
PDE4D-203ENST00000340635 GNAI3P08754 354 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms