RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
RET-201ENST00000340058 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
RET-201ENST00000340058 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
RET-201ENST00000340058 CABP4P57796 275 aa17.87■□□□□ 0.45
RET-201ENST00000340058 BRPF3Q9ULD4 1205 aa17.87■□□□□ 0.45
RET-201ENST00000340058 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
RET-201ENST00000340058 RNF214Q8ND24 703 aa17.87■□□□□ 0.45
RET-201ENST00000340058 ERC2O15083 957 aa17.86■□□□□ 0.45
RET-201ENST00000340058 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
RET-201ENST00000340058 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
RET-201ENST00000340058 CREBRFQ8IUR6 639 aa17.86■□□□□ 0.45
RET-201ENST00000340058 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
RET-201ENST00000340058 FBXW7Q969H0 707 aa17.86■□□□□ 0.45
RET-201ENST00000340058 LRRCC1Q9C099 1032 aa17.86■□□□□ 0.45
RET-201ENST00000340058 CFAP65Q6ZU64 1925 aaKnown RBP17.86■□□□□ 0.45
RET-201ENST00000340058 GLIPR1L2Q4G1C9 344 aa17.86■□□□□ 0.45
RET-201ENST00000340058 SMC3Q9UQE7 1217 aa17.85■□□□□ 0.45
RET-201ENST00000340058 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
RET-201ENST00000340058 CDK11BP21127 795 aaKnown RBP17.85■□□□□ 0.45
RET-201ENST00000340058 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
RET-201ENST00000340058 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
RET-201ENST00000340058 TAF7Q15545 349 aaPredicted RBP17.84■□□□□ 0.45
RET-201ENST00000340058 IFT57Q9NWB7 429 aa17.84■□□□□ 0.45
RET-201ENST00000340058 UPF3BQ9BZI7 483 aaKnown RBP17.84■□□□□ 0.45
RET-201ENST00000340058 TRAK2O60296 914 aa17.83■□□□□ 0.45
RET-201ENST00000340058 KDM6BO15054 1643 aa17.83■□□□□ 0.45
RET-201ENST00000340058 PTMSP20962 102 aa17.83■□□□□ 0.44
RET-201ENST00000340058 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
RET-201ENST00000340058 KIAA2012Q0VF49 1180 aa17.82■□□□□ 0.44
RET-201ENST00000340058 STK11IPQ8N1F8 1099 aa17.82■□□□□ 0.44
RET-201ENST00000340058 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
RET-201ENST00000340058 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
RET-201ENST00000340058 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
RET-201ENST00000340058 MPNDQ8N594 471 aa17.81■□□□□ 0.44
RET-201ENST00000340058 ZNF518AQ6AHZ1 1483 aa17.81■□□□□ 0.44
RET-201ENST00000340058 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
RET-201ENST00000340058 G3V3G9 751 aa17.81■□□□□ 0.44
RET-201ENST00000340058 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
RET-201ENST00000340058 AACSQ86V21 672 aa17.8■□□□□ 0.44
RET-201ENST00000340058 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
RET-201ENST00000340058 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 TNRQ92752 1358 aa17.8■□□□□ 0.44
RET-201ENST00000340058 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
RET-201ENST00000340058 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
RET-201ENST00000340058 CPLX1O14810 134 aa17.8■□□□□ 0.44
RET-201ENST00000340058 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
RET-201ENST00000340058 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 IL27Q8NEV9 243 aa17.8■□□□□ 0.44
RET-201ENST00000340058 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
RET-201ENST00000340058 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
RET-201ENST00000340058 STK3Q13188 491 aa17.79■□□□□ 0.44
RET-201ENST00000340058 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
RET-201ENST00000340058 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
RET-201ENST00000340058 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
RET-201ENST00000340058 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
RET-201ENST00000340058 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
RET-201ENST00000340058 RASSF8Q8NHQ8 419 aa17.79■□□□□ 0.44
RET-201ENST00000340058 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
RET-201ENST00000340058 MTMR7Q9Y216 660 aa17.79■□□□□ 0.44
RET-201ENST00000340058 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
RET-201ENST00000340058 MEIS3Q99687 375 aa17.79■□□□□ 0.44
RET-201ENST00000340058 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
RET-201ENST00000340058 BICD2Q8TD16 824 aa17.78■□□□□ 0.44
RET-201ENST00000340058 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
RET-201ENST00000340058 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
RET-201ENST00000340058 NUCB2P80303 420 aa17.78■□□□□ 0.44
RET-201ENST00000340058 FLIIQ13045 1269 aa17.78■□□□□ 0.44
RET-201ENST00000340058 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
RET-201ENST00000340058 NRDCO43847 1150 aa17.78■□□□□ 0.44
RET-201ENST00000340058 RAD21O60216 631 aa17.78■□□□□ 0.44
RET-201ENST00000340058 SPG7Q9UQ90 795 aa17.77■□□□□ 0.44
RET-201ENST00000340058 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
RET-201ENST00000340058 KCNA6P17658 529 aa17.77■□□□□ 0.43
RET-201ENST00000340058 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.43
RET-201ENST00000340058 FIBPO43427 364 aa17.76■□□□□ 0.43
RET-201ENST00000340058 KAT6BQ8WYB5 2073 aa17.76■□□□□ 0.43
RET-201ENST00000340058 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
RET-201ENST00000340058 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
RET-201ENST00000340058 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
RET-201ENST00000340058 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
RET-201ENST00000340058 ATP6V1DQ9Y5K8 247 aa17.75■□□□□ 0.43
RET-201ENST00000340058 ABCC11Q96J66 1382 aa17.75■□□□□ 0.43
RET-201ENST00000340058 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
RET-201ENST00000340058 RABEP1Q15276 862 aa17.75■□□□□ 0.43
RET-201ENST00000340058 KCNH5Q8NCM2 988 aa17.75■□□□□ 0.43
RET-201ENST00000340058 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
RET-201ENST00000340058 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
RET-201ENST00000340058 PI4KAP2A4QPH2 592 aa17.75■□□□□ 0.43
RET-201ENST00000340058 PI4KAP1Q8N8J0 262 aa17.75■□□□□ 0.43
RET-201ENST00000340058 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
RET-201ENST00000340058 HSPA2P54652 639 aa17.74■□□□□ 0.43
RET-201ENST00000340058 SLC39A6Q13433 755 aa17.74■□□□□ 0.43
RET-201ENST00000340058 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
RET-201ENST00000340058 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
RET-201ENST00000340058 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
RET-201ENST00000340058 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
RET-201ENST00000340058 NFXL1Q6ZNB6 911 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms