RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.62
FOXR2-201ENST00000339140 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
FOXR2-201ENST00000339140 TNNT2P45379 298 aaPredicted RBP11.2□□□□□ -0.62
FOXR2-201ENST00000339140 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
FOXR2-201ENST00000339140 NOB1Q9ULX3 412 aaKnown RBP11.2□□□□□ -0.62
FOXR2-201ENST00000339140 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
FOXR2-201ENST00000339140 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
FOXR2-201ENST00000339140 BAG4O95429 457 aaKnown RBP11.19□□□□□ -0.62
FOXR2-201ENST00000339140 TMEM57Q8N5G2 664 aa11.19□□□□□ -0.62
FOXR2-201ENST00000339140 KIF2CQ99661 725 aa11.19□□□□□ -0.62
FOXR2-201ENST00000339140 NOL7Q9UMY1 257 aaKnown RBP11.19□□□□□ -0.62
FOXR2-201ENST00000339140 NEXMIFQ5QGS0 1516 aa11.19□□□□□ -0.62
FOXR2-201ENST00000339140 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
FOXR2-201ENST00000339140 LNPKQ9C0E8 428 aa11.19□□□□□ -0.62
FOXR2-201ENST00000339140 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
FOXR2-201ENST00000339140 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
FOXR2-201ENST00000339140 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
FOXR2-201ENST00000339140 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
FOXR2-201ENST00000339140 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
FOXR2-201ENST00000339140 MED14O60244 1454 aa11.18□□□□□ -0.62
FOXR2-201ENST00000339140 SSFA2P28290 1259 aa11.17□□□□□ -0.62
FOXR2-201ENST00000339140 RABEP1Q15276 862 aa11.17□□□□□ -0.62
FOXR2-201ENST00000339140 CWC22Q9HCG8 908 aaKnown RBP11.17□□□□□ -0.62
FOXR2-201ENST00000339140 TNRQ92752 1358 aa11.17□□□□□ -0.62
FOXR2-201ENST00000339140 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
FOXR2-201ENST00000339140 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
FOXR2-201ENST00000339140 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
FOXR2-201ENST00000339140 DYNC1I1O14576 645 aa11.16□□□□□ -0.62
FOXR2-201ENST00000339140 CDC45O75419 566 aa11.16□□□□□ -0.62
FOXR2-201ENST00000339140 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
FOXR2-201ENST00000339140 PLEKHF1Q96S99 279 aa11.16□□□□□ -0.62
FOXR2-201ENST00000339140 A2ML1A8K2U0 1454 aa11.16□□□□□ -0.62
FOXR2-201ENST00000339140 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
FOXR2-201ENST00000339140 RIPK4P57078 832 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 ANKRD45Q5TZF3 282 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 EVC2Q86UK5 1308 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
FOXR2-201ENST00000339140 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
FOXR2-201ENST00000339140 ILDR1Q86SU0 546 aaPredicted RBP11.14□□□□□ -0.63
FOXR2-201ENST00000339140 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
FOXR2-201ENST00000339140 ZKSCAN5Q9Y2L8 839 aa11.14□□□□□ -0.63
FOXR2-201ENST00000339140 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
FOXR2-201ENST00000339140 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
FOXR2-201ENST00000339140 MCTP1Q6DN14 999 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
FOXR2-201ENST00000339140 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 PPIP5K1Q6PFW1 1433 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
FOXR2-201ENST00000339140 CEBPAP49715 358 aaPredicted RBP11.13□□□□□ -0.63
FOXR2-201ENST00000339140 CAVIN1Q6NZI2 390 aaKnown RBP11.13□□□□□ -0.63
FOXR2-201ENST00000339140 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
FOXR2-201ENST00000339140 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
FOXR2-201ENST00000339140 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 U2SURPO15042 1029 aaKnown RBP11.12□□□□□ -0.63
FOXR2-201ENST00000339140 UQCRHP07919 91 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 LMBRD1Q9NUN5 540 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
FOXR2-201ENST00000339140 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
FOXR2-201ENST00000339140 ST18O60284 1047 aa11.11□□□□□ -0.63
FOXR2-201ENST00000339140 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
FOXR2-201ENST00000339140 SASS6Q6UVJ0 657 aa11.11□□□□□ -0.63
FOXR2-201ENST00000339140 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
FOXR2-201ENST00000339140 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
FOXR2-201ENST00000339140 MBD3O95983 291 aa11.1□□□□□ -0.63
FOXR2-201ENST00000339140 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
FOXR2-201ENST00000339140 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
FOXR2-201ENST00000339140 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
FOXR2-201ENST00000339140 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
FOXR2-201ENST00000339140 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
FOXR2-201ENST00000339140 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
FOXR2-201ENST00000339140 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
FOXR2-201ENST00000339140 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
FOXR2-201ENST00000339140 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
FOXR2-201ENST00000339140 PRDM4Q9UKN5 801 aa11.09□□□□□ -0.63
FOXR2-201ENST00000339140 FCHSD2O94868 740 aa11.08□□□□□ -0.64
FOXR2-201ENST00000339140 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
FOXR2-201ENST00000339140 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
FOXR2-201ENST00000339140 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
FOXR2-201ENST00000339140 ARHGEF28Q8N1W1 1705 aaKnown RBP11.08□□□□□ -0.64
FOXR2-201ENST00000339140 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
FOXR2-201ENST00000339140 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
FOXR2-201ENST00000339140 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
FOXR2-201ENST00000339140 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
FOXR2-201ENST00000339140 CDC42BPGQ6DT37 1551 aa11.07□□□□□ -0.64
FOXR2-201ENST00000339140 ABCC4O15439 1325 aa11.07□□□□□ -0.64
FOXR2-201ENST00000339140 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
FOXR2-201ENST00000339140 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
FOXR2-201ENST00000339140 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
FOXR2-201ENST00000339140 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
FOXR2-201ENST00000339140 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms