RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
RTN3-201ENST00000338850 PRDM11Q9NQV5 511 aa14.15□□□□□ -0.14
RTN3-201ENST00000338850 VIRMAQ69YN4 1812 aaKnown RBP14.15□□□□□ -0.14
RTN3-201ENST00000338850 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
RTN3-201ENST00000338850 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
RTN3-201ENST00000338850 KRT27Q7Z3Y8 459 aa14.14□□□□□ -0.15
RTN3-201ENST00000338850 KIAA0232Q92628 1395 aa14.13□□□□□ -0.15
RTN3-201ENST00000338850 FAM98CQ17RN3 349 aaKnown RBP14.13□□□□□ -0.15
RTN3-201ENST00000338850 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
RTN3-201ENST00000338850 SPATA31A5Q5VU36 1347 aa14.13□□□□□ -0.15
RTN3-201ENST00000338850 SPATA31A7Q8IWB4 1347 aa14.13□□□□□ -0.15
RTN3-201ENST00000338850 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
RTN3-201ENST00000338850 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
RTN3-201ENST00000338850 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
RTN3-201ENST00000338850 NUTM2GQ5VZR2 741 aa14.12□□□□□ -0.15
RTN3-201ENST00000338850 IPO9Q96P70 1041 aaKnown RBP14.12□□□□□ -0.15
RTN3-201ENST00000338850 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
RTN3-201ENST00000338850 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
RTN3-201ENST00000338850 A0A0G2JS52 829 aa14.11□□□□□ -0.15
RTN3-201ENST00000338850 CHRNA2Q15822 529 aa14.11□□□□□ -0.15
RTN3-201ENST00000338850 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
RTN3-201ENST00000338850 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
RTN3-201ENST00000338850 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
RTN3-201ENST00000338850 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTN3-201ENST00000338850 DEFB132Q7Z7B7 95 aa14.1□□□□□ -0.15
RTN3-201ENST00000338850 EXOC6Q8TAG9 804 aa14.1□□□□□ -0.15
RTN3-201ENST00000338850 USP19O94966 1318 aa14.1□□□□□ -0.15
RTN3-201ENST00000338850 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
RTN3-201ENST00000338850 NSD2O96028 1365 aa14.09□□□□□ -0.15
RTN3-201ENST00000338850 ABTB2Q8N961 1025 aa14.09□□□□□ -0.15
RTN3-201ENST00000338850 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.09□□□□□ -0.15
RTN3-201ENST00000338850 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
RTN3-201ENST00000338850 THSD7AQ9UPZ6 1657 aa14.08□□□□□ -0.16
RTN3-201ENST00000338850 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.16
RTN3-201ENST00000338850 DUSP27Q5VZP5 1158 aa14.08□□□□□ -0.16
RTN3-201ENST00000338850 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
RTN3-201ENST00000338850 CPDO75976 1380 aa14.08□□□□□ -0.16
RTN3-201ENST00000338850 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
RTN3-201ENST00000338850 STRN4Q9NRL3 753 aa14.07□□□□□ -0.16
RTN3-201ENST00000338850 CABP1Q9NZU7 370 aa14.07□□□□□ -0.16
RTN3-201ENST00000338850 ADAMTS8Q9UP79 889 aa14.07□□□□□ -0.16
RTN3-201ENST00000338850 USP6P35125 1406 aa14.07□□□□□ -0.16
RTN3-201ENST00000338850 EVC2Q86UK5 1308 aa14.06□□□□□ -0.16
RTN3-201ENST00000338850 KDM2BQ8NHM5 1336 aa14.06□□□□□ -0.16
RTN3-201ENST00000338850 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
RTN3-201ENST00000338850 CAMTA1Q9Y6Y1 1673 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 GCP02774 474 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 FAM182BQ5T319 152 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 BACH2Q9BYV9 841 aa14.05□□□□□ -0.16
RTN3-201ENST00000338850 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
RTN3-201ENST00000338850 AAMPQ13685 434 aa14.04□□□□□ -0.16
RTN3-201ENST00000338850 CENPQQ7L2Z9 268 aaPredicted RBP14.04□□□□□ -0.16
RTN3-201ENST00000338850 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
RTN3-201ENST00000338850 SLIT3O75094 1523 aa14.02□□□□□ -0.16
RTN3-201ENST00000338850 E9PSI1 815 aa14.02□□□□□ -0.17
RTN3-201ENST00000338850 BAG6P46379 1132 aa14.02□□□□□ -0.17
RTN3-201ENST00000338850 EVA1CP58658 441 aa14.02□□□□□ -0.17
RTN3-201ENST00000338850 NLRP6P59044 892 aa14.02□□□□□ -0.17
RTN3-201ENST00000338850 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
RTN3-201ENST00000338850 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
RTN3-201ENST00000338850 PDE4AP27815 886 aa14.01□□□□□ -0.17
RTN3-201ENST00000338850 USP35Q9P2H5 1018 aa14.01□□□□□ -0.17
RTN3-201ENST00000338850 SRCAPQ6ZRS2 3230 aa14□□□□□ -0.17
RTN3-201ENST00000338850 CRBNQ96SW2 442 aa14□□□□□ -0.17
RTN3-201ENST00000338850 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
RTN3-201ENST00000338850 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 AATKQ6ZMQ8 1374 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 DDRGK1Q96HY6 314 aa13.99□□□□□ -0.17
RTN3-201ENST00000338850 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
RTN3-201ENST00000338850 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
RTN3-201ENST00000338850 TTC21BQ7Z4L5 1316 aa13.98□□□□□ -0.17
RTN3-201ENST00000338850 EN1Q05925 392 aaPredicted RBP13.98□□□□□ -0.17
RTN3-201ENST00000338850 FAM196AQ6ZSG2 479 aa13.98□□□□□ -0.17
RTN3-201ENST00000338850 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
RTN3-201ENST00000338850 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
RTN3-201ENST00000338850 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
RTN3-201ENST00000338850 ZBTB7CA1YPR0 619 aa13.97□□□□□ -0.17
RTN3-201ENST00000338850 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
RTN3-201ENST00000338850 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
RTN3-201ENST00000338850 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
RTN3-201ENST00000338850 TNS1Q9HBL0 1735 aaKnown RBP13.97□□□□□ -0.17
RTN3-201ENST00000338850 CRB1P82279 1406 aa13.97□□□□□ -0.17
RTN3-201ENST00000338850 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.17
RTN3-201ENST00000338850 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
RTN3-201ENST00000338850 CARD14Q9BXL6 1004 aa13.96□□□□□ -0.17
RTN3-201ENST00000338850 AKAP12Q02952 1782 aa13.96□□□□□ -0.18
RTN3-201ENST00000338850 TRIM37O94972 964 aa13.95□□□□□ -0.18
RTN3-201ENST00000338850 COL18A1P39060 1754 aa13.94□□□□□ -0.18
RTN3-201ENST00000338850 PSDA5PKW4 1024 aaPredicted RBP13.94□□□□□ -0.18
RTN3-201ENST00000338850 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
RTN3-201ENST00000338850 ARHGEF25Q86VW2 580 aa13.94□□□□□ -0.18
RTN3-201ENST00000338850 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
RTN3-201ENST00000338850 CAMKK2Q96RR4 588 aa13.94□□□□□ -0.18
RTN3-201ENST00000338850 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
RTN3-201ENST00000338850 KIF20BQ96Q89 1820 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms