RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 CCDC27Q2M243 656 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 NECTIN2Q92692 538 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 CPLX1O14810 134 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 NFXL1Q6ZNB6 911 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 TCP11L2Q8N4U5 519 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 DNAJC5Q9H3Z4 198 aa8.91□□□□□ -0.98
EPHA3-201ENST00000336596 REC8O95072 547 aa8.9□□□□□ -0.98
EPHA3-201ENST00000336596 NACAP1Q9BZK3 213 aa8.9□□□□□ -0.98
EPHA3-201ENST00000336596 IGHMBP2P38935 993 aaKnown RBP8.9□□□□□ -0.98
EPHA3-201ENST00000336596 IKQ13123 557 aaPredicted RBP8.9□□□□□ -0.98
EPHA3-201ENST00000336596 RALYLQ86SE5 291 aaKnown RBP8.9□□□□□ -0.98
EPHA3-201ENST00000336596 EXOC5O00471 708 aa8.9□□□□□ -0.99
EPHA3-201ENST00000336596 AK7Q96M32 723 aa8.9□□□□□ -0.99
EPHA3-201ENST00000336596 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.99
EPHA3-201ENST00000336596 NPHP3Q7Z494 1330 aa8.9□□□□□ -0.99
EPHA3-201ENST00000336596 NCKAP5LQ9HCH0 1330 aa8.9□□□□□ -0.99
EPHA3-201ENST00000336596 RDXP35241 583 aaKnown RBP8.9□□□□□ -0.99
EPHA3-201ENST00000336596 PZPP20742 1482 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 SAMD9LQ8IVG5 1584 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 UBTFL1P0CB47 393 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-201ENST00000336596 ADGBQ8N7X0 1667 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 ZNF530Q6P9A1 599 aaPredicted RBP8.89□□□□□ -0.99
EPHA3-201ENST00000336596 MBD5Q9P267 1494 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 ST5P78524 1137 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 PLCB2Q00722 1185 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 NME9Q86XW9 330 aa8.89□□□□□ -0.99
EPHA3-201ENST00000336596 PPP4R3BQ5MIZ7 849 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 PREX2Q70Z35 1606 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 PRAG1Q86YV5 1406 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 CLASP1Q7Z460 1538 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 KRT28Q7Z3Y7 464 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 ABCC1P33527 1531 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 CFAP65Q6ZU64 1925 aaKnown RBP8.88□□□□□ -0.99
EPHA3-201ENST00000336596 CT47B1P0C2W7 299 aaPredicted RBP8.88□□□□□ -0.99
EPHA3-201ENST00000336596 TTC39AQ5SRH9 613 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 MPHOSPH8Q99549 860 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 WASHC4Q2M389 1173 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 DDX54Q8TDD1 881 aaKnown RBP8.88□□□□□ -0.99
EPHA3-201ENST00000336596 LMTK3Q96Q04 1460 aa8.88□□□□□ -0.99
EPHA3-201ENST00000336596 RALGAPBQ86X10 1494 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 PSMA5P28066 241 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 MAGI2Q86UL8 1455 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 MPHOSPH10O00566 681 aaKnown RBP8.87□□□□□ -0.99
EPHA3-201ENST00000336596 RPGRQ92834 1020 aaKnown RBP8.87□□□□□ -0.99
EPHA3-201ENST00000336596 EHMT1Q9H9B1 1298 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
EPHA3-201ENST00000336596 ACEP12821 1306 aa8.87□□□□□ -0.99
EPHA3-201ENST00000336596 RBM5P52756 815 aaKnown RBP eCLIP8.86□□□□□ -0.99
EPHA3-201ENST00000336596 ATF7IPQ6VMQ6 1270 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 NF2P35240 595 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 MLH3Q9UHC1 1453 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 EIF2AK4Q9P2K8 1649 aaKnown RBP8.86□□□□□ -0.99
EPHA3-201ENST00000336596 PLIN1O60240 522 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 DISP3Q9P2K9 1392 aa8.86□□□□□ -0.99
EPHA3-201ENST00000336596 PAXIP1Q6ZW49 1069 aaPredicted RBP8.85□□□□□ -0.99
EPHA3-201ENST00000336596 MYO1BO43795 1136 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 DESP17661 470 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 CCDC70Q6NSX1 233 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 CCT4P50991 539 aaKnown RBP8.85□□□□□ -0.99
EPHA3-201ENST00000336596 TNIP1Q15025 636 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 LRRC59Q96AG4 307 aaKnown RBP8.85□□□□□ -0.99
EPHA3-201ENST00000336596 RRP1P56182 461 aaKnown RBP8.85□□□□□ -0.99
EPHA3-201ENST00000336596 CCDC57Q2TAC2 916 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 CNTROBQ8N137 903 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 ZNF710Q8N1W2 664 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
EPHA3-201ENST00000336596 HECW2Q9P2P5 1572 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 KCNA6P17658 529 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 NEUROD6Q96NK8 337 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 HDAC9Q9UKV0 1011 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 TTC21BQ7Z4L5 1316 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 C19orf44Q9H6X5 657 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 NSD2O96028 1365 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 FCHSD2O94868 740 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
EPHA3-201ENST00000336596 ARHGEF12Q9NZN5 1544 aa8.84□□□□□ -1
EPHA3-201ENST00000336596 AIMP1Q12904 312 aaKnown RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 DZIP1LQ8IYY4 767 aaKnown RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 ZNF428Q96B54 188 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 DNAJC2Q99543 621 aaKnown RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 ANO2Q9NQ90 1003 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 NPATQ14207 1427 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 TRAF1Q13077 416 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 GCC2Q8IWJ2 1684 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 IPO7O95373 1038 aaKnown RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 CAVIN4Q5BKX8 364 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 STK32BQ9NY57 414 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 TTLL12Q14166 644 aaPredicted RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 CLASRPQ8N2M8 674 aaKnown RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 TXLNAP40222 546 aa8.83□□□□□ -1
EPHA3-201ENST00000336596 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
EPHA3-201ENST00000336596 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
EPHA3-201ENST00000336596 YTHDC2Q9H6S0 1430 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms