RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 ZBED9Q6R2W3 1325 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 ERLIN2O94905 339 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 CETN2P41208 172 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 ST5P78524 1137 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 PEG3Q9GZU2 1588 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 ERBINQ96RT1 1412 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 RAB34Q9BZG1 259 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 NUTM2BA6NNL0 878 aaPredicted RBP5.91□□□□□ -1.46
RLIM-201ENST00000332687 NUTM2EB1AL46 878 aaPredicted RBP5.91□□□□□ -1.46
RLIM-201ENST00000332687 KIF20AO95235 890 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 TPRNQ4KMQ1 711 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 NUTM2AQ8IVF1 878 aaPredicted RBP5.91□□□□□ -1.46
RLIM-201ENST00000332687 RPGRQ92834 1020 aaKnown RBP5.91□□□□□ -1.46
RLIM-201ENST00000332687 NEUROD6Q96NK8 337 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 CCDC196A0A1B0GTZ2 297 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 DCTN1Q14203 1278 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 SMC3Q9UQE7 1217 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 NPHP3Q7Z494 1330 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 ABCC11Q96J66 1382 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 PIP4K2BP78356 416 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 CREBRFQ8IUR6 639 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 ERCC4Q92889 916 aaPredicted RBP5.91□□□□□ -1.46
RLIM-201ENST00000332687 CDK19Q9BWU1 502 aa5.91□□□□□ -1.46
RLIM-201ENST00000332687 EXOC5O00471 708 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 ZNF530Q6P9A1 599 aaPredicted RBP5.9□□□□□ -1.46
RLIM-201ENST00000332687 CTTNBP2Q8WZ74 1663 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 CCDC150Q8NCX0 1101 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 GCC1Q96CN9 775 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 PYM1Q9BRP8 204 aaKnown RBP5.9□□□□□ -1.46
RLIM-201ENST00000332687 CEP131Q9UPN4 1083 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 IFIT1P09914 478 aaKnown RBP5.9□□□□□ -1.46
RLIM-201ENST00000332687 PHAXQ9H814 394 aaKnown RBP5.9□□□□□ -1.46
RLIM-201ENST00000332687 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.46
RLIM-201ENST00000332687 CDC5LQ99459 802 aaKnown RBP5.9□□□□□ -1.47
RLIM-201ENST00000332687 FEZ1Q99689 392 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.47
RLIM-201ENST00000332687 GSTO1P78417 241 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 SASS6Q6UVJ0 657 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 CAGE1Q8TC20 777 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 CEP126Q9P2H0 1117 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 EIF4G3O43432 1585 aaKnown RBP5.9□□□□□ -1.47
RLIM-201ENST00000332687 KRT18P05783 430 aaKnown RBP5.9□□□□□ -1.47
RLIM-201ENST00000332687 IRX6P78412 446 aaPredicted RBP5.9□□□□□ -1.47
RLIM-201ENST00000332687 ARHGEF6Q15052 776 aa5.9□□□□□ -1.47
RLIM-201ENST00000332687 TTC21AQ8NDW8 1320 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 CERS3Q8IU89 383 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 FERMT2Q96AC1 680 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 LRRC45Q96CN5 670 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 FGFR1OPO95684 399 aaKnown RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 LARP1Q6PKG0 1096 aaKnown RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 PPP1R42Q7Z4L9 355 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 APBB1IPQ7Z5R6 666 aaPredicted RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 WDR63Q8IWG1 891 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 CCDC12Q8WUD4 166 aaPredicted RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 CUL5Q93034 780 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 PRAM1Q96QH2 718 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 ZNHIT6Q9NWK9 470 aaKnown RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 FAM161AQ3B820 660 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 NAP1L5Q96NT1 182 aaPredicted RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 RUFY1Q96T51 708 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 NYXQ9GZU5 481 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 UNC13AQ9UPW8 1703 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 ZNF518AQ6AHZ1 1483 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 HDGFL1Q5TGJ6 251 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 RNF41Q9H4P4 317 aaPredicted RBP5.89□□□□□ -1.47
RLIM-201ENST00000332687 TIAM1Q13009 1591 aa5.89□□□□□ -1.47
RLIM-201ENST00000332687 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 RAB11FIP3O75154 756 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 FCHSD2O94868 740 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 HSP90AB2PQ58FF8 381 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 STXBP4Q6ZWJ1 553 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 TNRQ92752 1358 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 NESP48681 1621 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 BAG3O95817 575 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 SSFA2P28290 1259 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 RABEP1Q15276 862 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 FSD1Q9BTV5 496 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 SEC63Q9UGP8 760 aaKnown RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 GOLGA6L3A6NEY3 463 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 CCDC69A6NI79 296 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 RBM27Q9P2N5 1060 aaKnown RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 EIF2AK4Q9P2K8 1649 aaKnown RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 GNAT3A8MTJ3 354 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 TTF1Q15361 905 aaPredicted RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 ZSCAN29Q8IWY8 852 aaPredicted RBP5.88□□□□□ -1.47
RLIM-201ENST00000332687 FERMT1Q9BQL6 677 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 NCOA1Q15788 1441 aa5.88□□□□□ -1.47
RLIM-201ENST00000332687 HLA-DOAP06340 250 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 HMGB1P1B2RPK0 211 aaPredicted RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 CDC45O75419 566 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 BICD2Q8TD16 824 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 RRP7AQ9Y3A4 280 aaKnown RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 DUOX2Q9NRD8 1548 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 AFAP1Q8N556 730 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 NKTRP30414 1462 aaKnown RBP5.87□□□□□ -1.47
RLIM-201ENST00000332687 BTBD11A6QL63 1104 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 DRC1Q96MC2 740 aa5.87□□□□□ -1.47
RLIM-201ENST00000332687 LRRC27Q9C0I9 530 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms