RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
PRAMEF1-201ENST00000332296 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
PRAMEF1-201ENST00000332296 SEC24BO95487 1268 aa12.91□□□□□ -0.34
PRAMEF1-201ENST00000332296 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
PRAMEF1-201ENST00000332296 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
PRAMEF1-201ENST00000332296 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
PRAMEF1-201ENST00000332296 PCDHB15Q9Y5E8 787 aa12.89□□□□□ -0.35
PRAMEF1-201ENST00000332296 NALCNQ8IZF0 1738 aa12.89□□□□□ -0.35
PRAMEF1-201ENST00000332296 PROSER2Q86WR7 435 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 A0A1W2PP64 1363 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 NSD2O96028 1365 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
PRAMEF1-201ENST00000332296 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
PRAMEF1-201ENST00000332296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRAMEF1-201ENST00000332296 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
PRAMEF1-201ENST00000332296 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
PRAMEF1-201ENST00000332296 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF1-201ENST00000332296 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF1-201ENST00000332296 GSE1Q14687 1217 aa12.85□□□□□ -0.35
PRAMEF1-201ENST00000332296 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
PRAMEF1-201ENST00000332296 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
PRAMEF1-201ENST00000332296 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.35
PRAMEF1-201ENST00000332296 TMEM94Q12767 1356 aa12.83□□□□□ -0.35
PRAMEF1-201ENST00000332296 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PRAMEF1-201ENST00000332296 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
PRAMEF1-201ENST00000332296 PLEKHF1Q96S99 279 aa12.82□□□□□ -0.36
PRAMEF1-201ENST00000332296 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
PRAMEF1-201ENST00000332296 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
PRAMEF1-201ENST00000332296 CDC42BPGQ6DT37 1551 aa12.82□□□□□ -0.36
PRAMEF1-201ENST00000332296 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
PRAMEF1-201ENST00000332296 U2SURPO15042 1029 aaKnown RBP12.81□□□□□ -0.36
PRAMEF1-201ENST00000332296 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 AAMPQ13685 434 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 ZKSCAN2Q63HK3 967 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 LRRC7Q96NW7 1537 aa12.8□□□□□ -0.36
PRAMEF1-201ENST00000332296 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
PRAMEF1-201ENST00000332296 TERF2IPQ9NYB0 399 aa12.79□□□□□ -0.36
PRAMEF1-201ENST00000332296 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
PRAMEF1-201ENST00000332296 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
PRAMEF1-201ENST00000332296 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
PRAMEF1-201ENST00000332296 FYB1O15117 783 aa12.78□□□□□ -0.36
PRAMEF1-201ENST00000332296 TRIM27P14373 513 aa12.78□□□□□ -0.36
PRAMEF1-201ENST00000332296 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
PRAMEF1-201ENST00000332296 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
PRAMEF1-201ENST00000332296 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.36
PRAMEF1-201ENST00000332296 ATF3P18847 181 aa12.77□□□□□ -0.37
PRAMEF1-201ENST00000332296 AKAP12Q02952 1782 aa12.77□□□□□ -0.37
PRAMEF1-201ENST00000332296 MSH6P52701 1360 aa12.76□□□□□ -0.37
PRAMEF1-201ENST00000332296 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
PRAMEF1-201ENST00000332296 ACEP12821 1306 aa12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 BECN1Q14457 450 aa12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
PRAMEF1-201ENST00000332296 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 RIPK4P57078 832 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 ARID3AQ99856 593 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 ANTXR1Q9H6X2 564 aa12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
PRAMEF1-201ENST00000332296 DCCP43146 1447 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms