RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
CPNE8-201ENST00000331366 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 PLEKHG1Q9ULL1 1385 aa11.19□□□□□ -0.62
CPNE8-201ENST00000331366 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
CPNE8-201ENST00000331366 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
CPNE8-201ENST00000331366 GCC1Q96CN9 775 aa11.18□□□□□ -0.62
CPNE8-201ENST00000331366 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
CPNE8-201ENST00000331366 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
CPNE8-201ENST00000331366 COL22A1Q8NFW1 1626 aaPredicted RBP11.18□□□□□ -0.62
CPNE8-201ENST00000331366 CRB1P82279 1406 aa11.17□□□□□ -0.62
CPNE8-201ENST00000331366 LTN1O94822 1766 aa11.17□□□□□ -0.62
CPNE8-201ENST00000331366 POLR3GLQ9BT43 218 aa11.17□□□□□ -0.62
CPNE8-201ENST00000331366 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-201ENST00000331366 IDI1Q13907 227 aa11.16□□□□□ -0.62
CPNE8-201ENST00000331366 TRPM3Q9HCF6 1732 aaPredicted RBP11.16□□□□□ -0.62
CPNE8-201ENST00000331366 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
CPNE8-201ENST00000331366 TRIM27P14373 513 aa11.16□□□□□ -0.62
CPNE8-201ENST00000331366 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
CPNE8-201ENST00000331366 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
CPNE8-201ENST00000331366 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.62
CPNE8-201ENST00000331366 IL13P35225 146 aa11.15□□□□□ -0.62
CPNE8-201ENST00000331366 MRC1P22897 1456 aa11.15□□□□□ -0.62
CPNE8-201ENST00000331366 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.63
CPNE8-201ENST00000331366 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.63
CPNE8-201ENST00000331366 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CPNE8-201ENST00000331366 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
CPNE8-201ENST00000331366 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
CPNE8-201ENST00000331366 KIF2CQ99661 725 aa11.14□□□□□ -0.63
CPNE8-201ENST00000331366 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
CPNE8-201ENST00000331366 RGPD8O14715 1765 aaPredicted RBP11.14□□□□□ -0.63
CPNE8-201ENST00000331366 SEC24BO95487 1268 aa11.14□□□□□ -0.63
CPNE8-201ENST00000331366 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
CPNE8-201ENST00000331366 SLIT3O75094 1523 aa11.13□□□□□ -0.63
CPNE8-201ENST00000331366 NFAT5O94916 1531 aa11.13□□□□□ -0.63
CPNE8-201ENST00000331366 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
CPNE8-201ENST00000331366 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
CPNE8-201ENST00000331366 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
CPNE8-201ENST00000331366 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
CPNE8-201ENST00000331366 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
CPNE8-201ENST00000331366 USP6P35125 1406 aa11.12□□□□□ -0.63
CPNE8-201ENST00000331366 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPNE8-201ENST00000331366 CYP2E1P05181 493 aaPredicted RBP11.12□□□□□ -0.63
CPNE8-201ENST00000331366 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
CPNE8-201ENST00000331366 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
CPNE8-201ENST00000331366 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 CHMP5Q9NZZ3 219 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
CPNE8-201ENST00000331366 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
CPNE8-201ENST00000331366 VAMP4O75379 141 aa11.1□□□□□ -0.63
CPNE8-201ENST00000331366 RAB3GAP1Q15042 981 aa11.1□□□□□ -0.63
CPNE8-201ENST00000331366 POLKQ9UBT6 870 aa11.1□□□□□ -0.63
CPNE8-201ENST00000331366 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
CPNE8-201ENST00000331366 MYH15Q9Y2K3 1946 aa11.1□□□□□ -0.63
CPNE8-201ENST00000331366 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
CPNE8-201ENST00000331366 PTPRCP08575 1304 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 NBR1Q14596 966 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 TRAK1Q9UPV9 953 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 AOX1Q06278 1338 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
CPNE8-201ENST00000331366 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
CPNE8-201ENST00000331366 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
CPNE8-201ENST00000331366 MCM4P33991 863 aa11.08□□□□□ -0.64
CPNE8-201ENST00000331366 GNAI1P63096 354 aa11.08□□□□□ -0.64
CPNE8-201ENST00000331366 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
CPNE8-201ENST00000331366 TERF1P54274 439 aa11.08□□□□□ -0.64
CPNE8-201ENST00000331366 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
CPNE8-201ENST00000331366 FRAT2O75474 233 aaPredicted RBP11.07□□□□□ -0.64
CPNE8-201ENST00000331366 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
CPNE8-201ENST00000331366 GLI3P10071 1580 aa11.07□□□□□ -0.64
CPNE8-201ENST00000331366 SKOR2Q2VWA4 1001 aaPredicted RBP11.07□□□□□ -0.64
CPNE8-201ENST00000331366 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
CPNE8-201ENST00000331366 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
CPNE8-201ENST00000331366 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
CPNE8-201ENST00000331366 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
CPNE8-201ENST00000331366 CHD1LQ86WJ1 897 aa11.06□□□□□ -0.64
CPNE8-201ENST00000331366 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
CPNE8-201ENST00000331366 HS1BP3Q53T59 392 aa11.06□□□□□ -0.64
CPNE8-201ENST00000331366 DCTPP1Q9H773 170 aa11.06□□□□□ -0.64
CPNE8-201ENST00000331366 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
CPNE8-201ENST00000331366 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
CPNE8-201ENST00000331366 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
CPNE8-201ENST00000331366 SKAP1Q86WV1 359 aa11.05□□□□□ -0.64
CPNE8-201ENST00000331366 METP08581 1390 aa11.05□□□□□ -0.64
CPNE8-201ENST00000331366 CLCN1P35523 988 aa11.05□□□□□ -0.64
CPNE8-201ENST00000331366 PPP1R9BQ96SB3 815 aa11.05□□□□□ -0.64
CPNE8-201ENST00000331366 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
CPNE8-201ENST00000331366 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 TMEM57Q8N5G2 664 aa11.04□□□□□ -0.64
CPNE8-201ENST00000331366 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms