RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ANKRD45Q5TZF3 282 aa29.86■■■□□ 2.37
SOX1-201ENST00000330949 CDC45O75419 566 aa29.86■■■□□ 2.37
SOX1-201ENST00000330949 DNTTIP2Q5QJE6 756 aaKnown RBP29.86■■■□□ 2.37
SOX1-201ENST00000330949 RBM27Q9P2N5 1060 aaKnown RBP29.86■■■□□ 2.37
SOX1-201ENST00000330949 PPRC1Q5VV67 1664 aaKnown RBP29.85■■■□□ 2.37
SOX1-201ENST00000330949 RAPGEF3O95398 923 aa29.85■■■□□ 2.37
SOX1-201ENST00000330949 CFAP44Q96MT7 982 aa29.85■■■□□ 2.37
SOX1-201ENST00000330949 STK26Q9P289 416 aa29.84■■■□□ 2.37
SOX1-201ENST00000330949 SYCE3A1L190 88 aa29.84■■■□□ 2.37
SOX1-201ENST00000330949 LETM1O95202 739 aaPredicted RBP29.84■■■□□ 2.37
SOX1-201ENST00000330949 GTF2F1P35269 517 aaKnown RBP eCLIP29.83■■■□□ 2.37
SOX1-201ENST00000330949 EFCAB6Q5THR3 1501 aa29.82■■■□□ 2.37
SOX1-201ENST00000330949 TMEM63CQ9P1W3 806 aa29.82■■■□□ 2.36
SOX1-201ENST00000330949 SBNO2Q9Y2G9 1366 aa29.82■■■□□ 2.36
SOX1-201ENST00000330949 U2AF1L5P0DN76 240 aaPredicted RBP29.81■■■□□ 2.36
SOX1-201ENST00000330949 U2AF1Q01081 240 aaKnown RBP eCLIP29.81■■■□□ 2.36
SOX1-201ENST00000330949 CABP2Q9NPB3 220 aa29.81■■■□□ 2.36
SOX1-201ENST00000330949 MBD3O95983 291 aa29.81■■■□□ 2.36
SOX1-201ENST00000330949 NPATQ14207 1427 aa29.8■■■□□ 2.36
SOX1-201ENST00000330949 NPM1P06748 294 aaKnown RBP eCLIP29.8■■■□□ 2.36
SOX1-201ENST00000330949 PKP1Q13835 747 aa29.8■■■□□ 2.36
SOX1-201ENST00000330949 KIF1BO60333 1816 aa29.8■■■□□ 2.36
SOX1-201ENST00000330949 CHMP4BQ9H444 224 aaKnown RBP29.8■■■□□ 2.36
SOX1-201ENST00000330949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.8■■■□□ 2.36
SOX1-201ENST00000330949 MYOM2P54296 1465 aa29.79■■■□□ 2.36
SOX1-201ENST00000330949 PPP4R3BQ5MIZ7 849 aa29.78■■■□□ 2.36
SOX1-201ENST00000330949 ZNF710Q8N1W2 664 aa29.78■■■□□ 2.36
SOX1-201ENST00000330949 CBX1P83916 185 aa29.77■■■□□ 2.36
SOX1-201ENST00000330949 C14orf93Q9H972 538 aaKnown RBP29.77■■■□□ 2.36
SOX1-201ENST00000330949 IL16Q14005 1332 aa29.77■■■□□ 2.36
SOX1-201ENST00000330949 USP32Q8NFA0 1604 aa29.76■■■□□ 2.35
SOX1-201ENST00000330949 MYO3AQ8NEV4 1616 aa29.76■■■□□ 2.35
SOX1-201ENST00000330949 PIBF1Q8WXW3 757 aa29.75■■■□□ 2.35
SOX1-201ENST00000330949 PPIP5K1Q6PFW1 1433 aa29.75■■■□□ 2.35
SOX1-201ENST00000330949 RNF214Q8ND24 703 aa29.75■■■□□ 2.35
SOX1-201ENST00000330949 MED14O60244 1454 aa29.74■■■□□ 2.35
SOX1-201ENST00000330949 KIF3AQ9Y496 699 aa29.74■■■□□ 2.35
SOX1-201ENST00000330949 CD109Q6YHK3 1445 aa29.74■■■□□ 2.35
SOX1-201ENST00000330949 ST18O60284 1047 aa29.73■■■□□ 2.35
SOX1-201ENST00000330949 ALDH1L2Q3SY69 923 aa29.73■■■□□ 2.35
SOX1-201ENST00000330949 U2SURPO15042 1029 aaKnown RBP29.73■■■□□ 2.35
SOX1-201ENST00000330949 TSPY26PQ9H489 355 aa29.73■■■□□ 2.35
SOX1-201ENST00000330949 ZDHHC9Q9Y397 364 aa29.71■■■□□ 2.35
SOX1-201ENST00000330949 NOLC1Q14978 699 aaKnown RBP eCLIP29.7■■■□□ 2.35
SOX1-201ENST00000330949 NRXN1Q9ULB1 1477 aa29.7■■■□□ 2.35
SOX1-201ENST00000330949 TMPOP42166 694 aaKnown RBP29.7■■■□□ 2.34
SOX1-201ENST00000330949 SYAP1Q96A49 352 aaPredicted RBP29.69■■■□□ 2.34
SOX1-201ENST00000330949 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
SOX1-201ENST00000330949 GGNBP2Q9H3C7 697 aa29.69■■■□□ 2.34
SOX1-201ENST00000330949 TRIM35Q9UPQ4 493 aa29.68■■■□□ 2.34
SOX1-201ENST00000330949 NEURL4Q96JN8 1562 aa29.68■■■□□ 2.34
SOX1-201ENST00000330949 ZGPATQ8N5A5 531 aaKnown RBP29.68■■■□□ 2.34
SOX1-201ENST00000330949 USP26Q9BXU7 913 aa29.68■■■□□ 2.34
SOX1-201ENST00000330949 NSFL1CQ9UNZ2 370 aaKnown RBP29.68■■■□□ 2.34
SOX1-201ENST00000330949 SRPK2P78362 688 aaKnown RBP29.67■■■□□ 2.34
SOX1-201ENST00000330949 ATP2B3Q16720 1220 aa29.67■■■□□ 2.34
SOX1-201ENST00000330949 FRMPD1Q5SYB0 1578 aa29.67■■■□□ 2.34
SOX1-201ENST00000330949 ZBTB7BO15156 539 aaPredicted RBP29.67■■■□□ 2.34
SOX1-201ENST00000330949 TSC1Q92574 1164 aa29.67■■■□□ 2.34
SOX1-201ENST00000330949 ADGRB3O60242 1522 aa29.67■■■□□ 2.34
SOX1-201ENST00000330949 TAF3Q5VWG9 929 aa29.67■■■□□ 2.34
SOX1-201ENST00000330949 JARID2Q92833 1246 aaPredicted RBP29.67■■■□□ 2.34
SOX1-201ENST00000330949 BBXQ8WY36 941 aaPredicted RBP29.66■■■□□ 2.34
SOX1-201ENST00000330949 FAM184AQ8NB25 1140 aa29.65■■■□□ 2.34
SOX1-201ENST00000330949 PHF14O94880 888 aa29.64■■■□□ 2.34
SOX1-201ENST00000330949 GSPT1P15170 499 aaKnown RBP29.64■■■□□ 2.34
SOX1-201ENST00000330949 BRPF1P55201 1214 aaPredicted RBP29.63■■■□□ 2.33
SOX1-201ENST00000330949 ZNF428Q96B54 188 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 PLEKHF1Q96S99 279 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 POGZQ7Z3K3 1410 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 NSD2O96028 1365 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 UVSSAQ2YD98 709 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 INTS3Q68E01 1043 aaKnown RBP29.63■■■□□ 2.33
SOX1-201ENST00000330949 FKBP5Q13451 457 aaPredicted RBP29.63■■■□□ 2.33
SOX1-201ENST00000330949 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 PDCL2Q8N4E4 241 aa29.63■■■□□ 2.33
SOX1-201ENST00000330949 ZBTB7CA1YPR0 619 aa29.62■■■□□ 2.33
SOX1-201ENST00000330949 SPTLC3Q9NUV7 552 aa29.62■■■□□ 2.33
SOX1-201ENST00000330949 IDI1Q13907 227 aa29.61■■■□□ 2.33
SOX1-201ENST00000330949 BCL2L12Q9HB09 334 aa29.61■■■□□ 2.33
SOX1-201ENST00000330949 MINK1Q8N4C8 1332 aaPredicted RBP29.61■■■□□ 2.33
SOX1-201ENST00000330949 ADGRB1O14514 1584 aa29.61■■■□□ 2.33
SOX1-201ENST00000330949 LMTK2Q8IWU2 1503 aa29.6■■■□□ 2.33
SOX1-201ENST00000330949 EVC2Q86UK5 1308 aa29.6■■■□□ 2.33
SOX1-201ENST00000330949 PDE4CQ08493 712 aa29.59■■■□□ 2.33
SOX1-201ENST00000330949 C1orf115Q9H7X2 142 aa29.59■■■□□ 2.33
SOX1-201ENST00000330949 PLEKHM2Q8IWE5 1019 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 YEATS2Q9ULM3 1422 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 FBLN1P23142 703 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 PIK3R4Q99570 1358 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 GTF2E1P29083 439 aaPredicted RBP29.58■■■□□ 2.33
SOX1-201ENST00000330949 TTC22Q5TAA0 569 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 CASC1Q6TDU7 716 aa29.58■■■□□ 2.33
SOX1-201ENST00000330949 SIRT2Q8IXJ6 389 aa29.57■■■□□ 2.32
SOX1-201ENST00000330949 ARHGAP45Q92619 1136 aa29.57■■■□□ 2.32
SOX1-201ENST00000330949 DIAPH3Q9NSV4 1193 aa29.57■■■□□ 2.32
SOX1-201ENST00000330949 QRICH2Q9H0J4 1663 aa29.56■■■□□ 2.32
SOX1-201ENST00000330949 CHAMP1Q96JM3 812 aa29.56■■■□□ 2.32
SOX1-201ENST00000330949 CHAF1AQ13111 956 aaPredicted RBP29.55■■■□□ 2.32
SOX1-201ENST00000330949 ZNF830Q96NB3 372 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms