RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 POLKQ9UBT6 870 aa19.4■□□□□ 0.7
BRCC3-201ENST00000330045 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.69
BRCC3-201ENST00000330045 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
BRCC3-201ENST00000330045 SLIT1O75093 1534 aa19.39■□□□□ 0.69
BRCC3-201ENST00000330045 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
BRCC3-201ENST00000330045 FBLN1P23142 703 aa19.37■□□□□ 0.69
BRCC3-201ENST00000330045 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
BRCC3-201ENST00000330045 TECPR2O15040 1411 aa19.37■□□□□ 0.69
BRCC3-201ENST00000330045 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
BRCC3-201ENST00000330045 CPS1P31327 1500 aa19.36■□□□□ 0.69
BRCC3-201ENST00000330045 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
BRCC3-201ENST00000330045 MAP2P11137 1827 aaKnown RBP19.36■□□□□ 0.69
BRCC3-201ENST00000330045 NUCB1Q02818 461 aa19.35■□□□□ 0.69
BRCC3-201ENST00000330045 PRR36Q9H6K5 1346 aa19.35■□□□□ 0.69
BRCC3-201ENST00000330045 KNDC1Q76NI1 1749 aa19.35■□□□□ 0.69
BRCC3-201ENST00000330045 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
BRCC3-201ENST00000330045 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
BRCC3-201ENST00000330045 NFE2L2Q16236 605 aa19.34■□□□□ 0.69
BRCC3-201ENST00000330045 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
BRCC3-201ENST00000330045 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
BRCC3-201ENST00000330045 ADAMTSL3P82987 1691 aa19.34■□□□□ 0.69
BRCC3-201ENST00000330045 HMOX1P09601 288 aa19.33■□□□□ 0.69
BRCC3-201ENST00000330045 PHACTR3Q96KR7 559 aa19.33■□□□□ 0.69
BRCC3-201ENST00000330045 CALD1Q05682 793 aaKnown RBP19.33■□□□□ 0.68
BRCC3-201ENST00000330045 SPRYD3Q8NCJ5 442 aa19.33■□□□□ 0.68
BRCC3-201ENST00000330045 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.68
BRCC3-201ENST00000330045 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
BRCC3-201ENST00000330045 VAMP4O75379 141 aa19.32■□□□□ 0.68
BRCC3-201ENST00000330045 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
BRCC3-201ENST00000330045 LNPKQ9C0E8 428 aa19.31■□□□□ 0.68
BRCC3-201ENST00000330045 EDC4Q6P2E9 1401 aaKnown RBP19.31■□□□□ 0.68
BRCC3-201ENST00000330045 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
BRCC3-201ENST00000330045 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
BRCC3-201ENST00000330045 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 ZBTB7BO15156 539 aaPredicted RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 GNAI1P63096 354 aa19.3■□□□□ 0.68
BRCC3-201ENST00000330045 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 SIRT1Q96EB6 747 aa19.3■□□□□ 0.68
BRCC3-201ENST00000330045 RBM33Q96EV2 1170 aaKnown RBP19.3■□□□□ 0.68
BRCC3-201ENST00000330045 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
BRCC3-201ENST00000330045 IL13P35225 146 aa19.29■□□□□ 0.68
BRCC3-201ENST00000330045 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
BRCC3-201ENST00000330045 CHMP5Q9NZZ3 219 aa19.29■□□□□ 0.68
BRCC3-201ENST00000330045 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
BRCC3-201ENST00000330045 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
BRCC3-201ENST00000330045 KCNA6P17658 529 aa19.28■□□□□ 0.68
BRCC3-201ENST00000330045 HSCBQ8IWL3 235 aa19.28■□□□□ 0.68
BRCC3-201ENST00000330045 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
BRCC3-201ENST00000330045 AATKQ6ZMQ8 1374 aa19.27■□□□□ 0.68
BRCC3-201ENST00000330045 NME9Q86XW9 330 aa19.27■□□□□ 0.68
BRCC3-201ENST00000330045 RBM25P49756 843 aaKnown RBP19.27■□□□□ 0.67
BRCC3-201ENST00000330045 GCC1Q96CN9 775 aa19.27■□□□□ 0.67
BRCC3-201ENST00000330045 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.67
BRCC3-201ENST00000330045 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
BRCC3-201ENST00000330045 MCM4P33991 863 aa19.26■□□□□ 0.67
BRCC3-201ENST00000330045 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
BRCC3-201ENST00000330045 MON2Q7Z3U7 1717 aa19.26■□□□□ 0.67
BRCC3-201ENST00000330045 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
BRCC3-201ENST00000330045 ELL2O00472 640 aaPredicted RBP19.25■□□□□ 0.67
BRCC3-201ENST00000330045 BMP2KLQ5H9B9 411 aa19.25■□□□□ 0.67
BRCC3-201ENST00000330045 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
BRCC3-201ENST00000330045 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
BRCC3-201ENST00000330045 C1orf115Q9H7X2 142 aa19.24■□□□□ 0.67
BRCC3-201ENST00000330045 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
BRCC3-201ENST00000330045 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
BRCC3-201ENST00000330045 COG3Q96JB2 828 aa19.23■□□□□ 0.67
BRCC3-201ENST00000330045 CFAP44Q96MT7 982 aa19.23■□□□□ 0.67
BRCC3-201ENST00000330045 ABCC4O15439 1325 aa19.23■□□□□ 0.67
BRCC3-201ENST00000330045 AKAP12Q02952 1782 aa19.22■□□□□ 0.67
BRCC3-201ENST00000330045 SNX21Q969T3 373 aa19.22■□□□□ 0.67
BRCC3-201ENST00000330045 ANKLE2Q86XL3 938 aa19.21■□□□□ 0.67
BRCC3-201ENST00000330045 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
BRCC3-201ENST00000330045 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
BRCC3-201ENST00000330045 SIRT2Q8IXJ6 389 aa19.2■□□□□ 0.66
BRCC3-201ENST00000330045 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
BRCC3-201ENST00000330045 API5Q9BZZ5 524 aaKnown RBP19.19■□□□□ 0.66
BRCC3-201ENST00000330045 ACEP12821 1306 aa19.19■□□□□ 0.66
BRCC3-201ENST00000330045 ANO8Q9HCE9 1232 aaPredicted RBP19.19■□□□□ 0.66
BRCC3-201ENST00000330045 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
BRCC3-201ENST00000330045 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
BRCC3-201ENST00000330045 ZNF142P52746 1687 aaPredicted RBP19.18■□□□□ 0.66
BRCC3-201ENST00000330045 XRN1Q8IZH2 1706 aaKnown RBP19.18■□□□□ 0.66
BRCC3-201ENST00000330045 FAM83GA6ND36 823 aa19.18■□□□□ 0.66
BRCC3-201ENST00000330045 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
BRCC3-201ENST00000330045 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
BRCC3-201ENST00000330045 DIP2AQ14689 1571 aa19.17■□□□□ 0.66
BRCC3-201ENST00000330045 TRAK2O60296 914 aa19.16■□□□□ 0.66
BRCC3-201ENST00000330045 DDIT3P35638 169 aa19.16■□□□□ 0.66
BRCC3-201ENST00000330045 SETD1BQ9UPS6 1966 aaKnown RBP19.16■□□□□ 0.66
BRCC3-201ENST00000330045 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
BRCC3-201ENST00000330045 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
BRCC3-201ENST00000330045 GOLGA6L3A6NEY3 463 aa19.15■□□□□ 0.66
BRCC3-201ENST00000330045 TBC1D9Q6ZT07 1266 aa19.15■□□□□ 0.66
BRCC3-201ENST00000330045 KIF2CQ99661 725 aa19.15■□□□□ 0.66
BRCC3-201ENST00000330045 GZF1Q9H116 711 aaPredicted RBP19.15■□□□□ 0.66
BRCC3-201ENST00000330045 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.66
BRCC3-201ENST00000330045 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
BRCC3-201ENST00000330045 TOPAZ1Q8N9V7 1692 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms