RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
TRIM49-201ENST00000329758 HSCBQ8IWL3 235 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 YY1AP1Q9H869 796 aa9.26□□□□□ -0.93
TRIM49-201ENST00000329758 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
TRIM49-201ENST00000329758 MMP14P50281 582 aa9.25□□□□□ -0.93
TRIM49-201ENST00000329758 ATP2B3Q16720 1220 aa9.25□□□□□ -0.93
TRIM49-201ENST00000329758 MORC1Q86VD1 984 aa9.25□□□□□ -0.93
TRIM49-201ENST00000329758 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 PRAM1Q96QH2 718 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 RPGRIP1LQ68CZ1 1315 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 GOLGA6L22H0YM25 854 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
TRIM49-201ENST00000329758 RAB3GAP1Q15042 981 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 ZNF771Q7L3S4 317 aaPredicted RBP9.24□□□□□ -0.93
TRIM49-201ENST00000329758 TNPO1Q92973 898 aaKnown RBP9.24□□□□□ -0.93
TRIM49-201ENST00000329758 FEZ1Q99689 392 aa9.24□□□□□ -0.93
TRIM49-201ENST00000329758 FBLN1P23142 703 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 CHMP4AQ9BY43 222 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 A2ML1A8K2U0 1454 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 TULP4Q9NRJ4 1543 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 CGNL1Q0VF96 1302 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 KIAA2012Q0VF49 1180 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 FER1L4A9Z1Z3 1794 aa9.23□□□□□ -0.93
TRIM49-201ENST00000329758 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 GGNBP2Q9H3C7 697 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 C3P01024 1663 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 ZBTB22O15209 634 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 MTHFSP49914 203 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 SNX21Q969T3 373 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
TRIM49-201ENST00000329758 TULP2O00295 520 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 CLGNO14967 610 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 KCNJ4P48050 445 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 FAM193AP78312 1265 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 AXDND1Q5T1B0 1012 aaPredicted RBP9.21□□□□□ -0.94
TRIM49-201ENST00000329758 PDCL2Q8N4E4 241 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 EVC2Q86UK5 1308 aa9.21□□□□□ -0.94
TRIM49-201ENST00000329758 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 DHX37Q8IY37 1157 aaKnown RBP9.2□□□□□ -0.94
TRIM49-201ENST00000329758 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 OGFRQ9NZT2 677 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 PTPRMP28827 1452 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 BCAR3O75815 825 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 CREBRFQ8IUR6 639 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 C22orf23Q9BZE7 217 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 GEMIN8Q9NWZ8 242 aaKnown RBP9.2□□□□□ -0.94
TRIM49-201ENST00000329758 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
TRIM49-201ENST00000329758 NCKAP5LQ9HCH0 1330 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
TRIM49-201ENST00000329758 NKTRP30414 1462 aaKnown RBP9.19□□□□□ -0.94
TRIM49-201ENST00000329758 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 IGHDP01880 384 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 ANKRD7Q92527 254 aa9.19□□□□□ -0.94
TRIM49-201ENST00000329758 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
TRIM49-201ENST00000329758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRIM49-201ENST00000329758 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
TRIM49-201ENST00000329758 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
TRIM49-201ENST00000329758 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
TRIM49-201ENST00000329758 RIMS2Q9UQ26 1411 aa9.18□□□□□ -0.94
TRIM49-201ENST00000329758 PDE3AQ14432 1141 aa9.17□□□□□ -0.94
TRIM49-201ENST00000329758 ZNF622Q969S3 477 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM49-201ENST00000329758 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
TRIM49-201ENST00000329758 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
TRIM49-201ENST00000329758 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
TRIM49-201ENST00000329758 YTHDC2Q9H6S0 1430 aaKnown RBP9.17□□□□□ -0.94
TRIM49-201ENST00000329758 DDX49Q9Y6V7 483 aaKnown RBP9.17□□□□□ -0.94
TRIM49-201ENST00000329758 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 TXNDC2Q86VQ3 553 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
TRIM49-201ENST00000329758 TNRQ92752 1358 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 E9PSI1 815 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
TRIM49-201ENST00000329758 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
TRIM49-201ENST00000329758 PSEN1P49768 467 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM49-201ENST00000329758 SYCP1Q15431 976 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 BCL2L13Q9BXK5 485 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
TRIM49-201ENST00000329758 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
TRIM49-201ENST00000329758 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms