RNA–Protein interactions for RNA: ENST00000328895.8

GKN2-201, Transcript of gastrokine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN2, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-201ENST00000328895 IRF5Q13568 498 aa11.63□□□□□ -0.55
GKN2-201ENST00000328895 POM121Q96HA1 1249 aa11.63□□□□□ -0.55
GKN2-201ENST00000328895 WDR4P57081 412 aaKnown RBP11.62□□□□□ -0.55
GKN2-201ENST00000328895 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
GKN2-201ENST00000328895 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
GKN2-201ENST00000328895 CAPN5O15484 640 aaPredicted RBP11.61□□□□□ -0.55
GKN2-201ENST00000328895 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
GKN2-201ENST00000328895 RAB15P59190 212 aa11.61□□□□□ -0.55
GKN2-201ENST00000328895 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
GKN2-201ENST00000328895 RAD21O60216 631 aa11.6□□□□□ -0.55
GKN2-201ENST00000328895 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
GKN2-201ENST00000328895 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
GKN2-201ENST00000328895 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
GKN2-201ENST00000328895 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
GKN2-201ENST00000328895 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
GKN2-201ENST00000328895 TIMP2P16035 220 aa11.58□□□□□ -0.56
GKN2-201ENST00000328895 ITPKCQ96DU7 683 aa11.58□□□□□ -0.56
GKN2-201ENST00000328895 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
GKN2-201ENST00000328895 KLF16Q9BXK1 252 aaPredicted RBP11.57□□□□□ -0.56
GKN2-201ENST00000328895 PPP1R26Q5T8A7 1209 aaPredicted RBP11.56□□□□□ -0.56
GKN2-201ENST00000328895 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
GKN2-201ENST00000328895 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
GKN2-201ENST00000328895 BMP1P13497 986 aa11.54□□□□□ -0.56
GKN2-201ENST00000328895 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
GKN2-201ENST00000328895 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
GKN2-201ENST00000328895 DHX9Q08211 1270 aaKnown RBP11.54□□□□□ -0.56
GKN2-201ENST00000328895 WASHC4Q2M389 1173 aa11.54□□□□□ -0.56
GKN2-201ENST00000328895 CLUAP1Q96AJ1 413 aa11.54□□□□□ -0.56
GKN2-201ENST00000328895 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
GKN2-201ENST00000328895 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
GKN2-201ENST00000328895 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
GKN2-201ENST00000328895 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
GKN2-201ENST00000328895 ESPNB1AK53 854 aa11.52□□□□□ -0.57
GKN2-201ENST00000328895 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
GKN2-201ENST00000328895 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
GKN2-201ENST00000328895 POTECB2RU33 542 aa11.5□□□□□ -0.57
GKN2-201ENST00000328895 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
GKN2-201ENST00000328895 GMPR2Q9P2T1 348 aaKnown RBP11.5□□□□□ -0.57
GKN2-201ENST00000328895 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
GKN2-201ENST00000328895 TRIM46Q7Z4K8 759 aa11.49□□□□□ -0.57
GKN2-201ENST00000328895 CEP126Q9P2H0 1117 aa11.49□□□□□ -0.57
GKN2-201ENST00000328895 CBLBQ13191 982 aa11.48□□□□□ -0.57
GKN2-201ENST00000328895 RNF20Q5VTR2 975 aa11.48□□□□□ -0.57
GKN2-201ENST00000328895 ZNF784Q8NCA9 323 aaPredicted RBP11.48□□□□□ -0.57
GKN2-201ENST00000328895 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
GKN2-201ENST00000328895 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
GKN2-201ENST00000328895 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
GKN2-201ENST00000328895 C6orf118Q5T5N4 469 aa11.45□□□□□ -0.58
GKN2-201ENST00000328895 MEIOBQ8N635 442 aa11.45□□□□□ -0.58
GKN2-201ENST00000328895 PURBQ96QR8 312 aaKnown RBP11.45□□□□□ -0.58
GKN2-201ENST00000328895 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
GKN2-201ENST00000328895 POM121CA8CG34 1229 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 C11orf95C9JLR9 678 aaPredicted RBP11.44□□□□□ -0.58
GKN2-201ENST00000328895 UPP2O95045 317 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 SOX11P35716 441 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 SCARF1Q14162 830 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
GKN2-201ENST00000328895 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 PCDHB11Q9Y5F2 797 aa11.44□□□□□ -0.58
GKN2-201ENST00000328895 SLFNL1Q499Z3 407 aa11.43□□□□□ -0.58
GKN2-201ENST00000328895 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
GKN2-201ENST00000328895 LILRA1O75019 489 aa11.42□□□□□ -0.58
GKN2-201ENST00000328895 BMP2P12643 396 aa11.42□□□□□ -0.58
GKN2-201ENST00000328895 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
GKN2-201ENST00000328895 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
GKN2-201ENST00000328895 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
GKN2-201ENST00000328895 Q6ZVU0 165 aa11.41□□□□□ -0.58
GKN2-201ENST00000328895 RNF135Q8IUD6 432 aa11.41□□□□□ -0.58
GKN2-201ENST00000328895 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
GKN2-201ENST00000328895 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
GKN2-201ENST00000328895 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
GKN2-201ENST00000328895 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
GKN2-201ENST00000328895 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
GKN2-201ENST00000328895 ALG2Q9H553 416 aa11.4□□□□□ -0.58
GKN2-201ENST00000328895 A6NJR5 290 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
GKN2-201ENST00000328895 RELBQ01201 579 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 PHTF2Q8N3S3 785 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
GKN2-201ENST00000328895 SCTRP47872 440 aa11.38□□□□□ -0.59
GKN2-201ENST00000328895 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
GKN2-201ENST00000328895 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
GKN2-201ENST00000328895 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
GKN2-201ENST00000328895 ADH1AP07327 375 aa11.37□□□□□ -0.59
GKN2-201ENST00000328895 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
GKN2-201ENST00000328895 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
GKN2-201ENST00000328895 ZNF395Q9H8N7 513 aaPredicted RBP11.37□□□□□ -0.59
GKN2-201ENST00000328895 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
GKN2-201ENST00000328895 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
GKN2-201ENST00000328895 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
GKN2-201ENST00000328895 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
GKN2-201ENST00000328895 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
GKN2-201ENST00000328895 SOBPA7XYQ1 873 aa11.32□□□□□ -0.6
GKN2-201ENST00000328895 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
GKN2-201ENST00000328895 SPINT1O43278 529 aa11.32□□□□□ -0.6
GKN2-201ENST00000328895 MYCP01106 439 aaPredicted RBP11.32□□□□□ -0.6
GKN2-201ENST00000328895 SKIP12755 728 aa11.32□□□□□ -0.6
GKN2-201ENST00000328895 PTGIRP43119 386 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms