RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 ESCO1Q5FWF5 840 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 DCCP43146 1447 aa18.53■□□□□ 0.56
CHEK2-201ENST00000328354 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
CHEK2-201ENST00000328354 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
CHEK2-201ENST00000328354 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
CHEK2-201ENST00000328354 ABTB2Q8N961 1025 aa18.52■□□□□ 0.55
CHEK2-201ENST00000328354 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.55
CHEK2-201ENST00000328354 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
CHEK2-201ENST00000328354 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
CHEK2-201ENST00000328354 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
CHEK2-201ENST00000328354 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
CHEK2-201ENST00000328354 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
CHEK2-201ENST00000328354 LTN1O94822 1766 aa18.5■□□□□ 0.55
CHEK2-201ENST00000328354 NFAT5O94916 1531 aa18.49■□□□□ 0.55
CHEK2-201ENST00000328354 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
CHEK2-201ENST00000328354 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
CHEK2-201ENST00000328354 BCAR3O75815 825 aa18.49■□□□□ 0.55
CHEK2-201ENST00000328354 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
CHEK2-201ENST00000328354 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
CHEK2-201ENST00000328354 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
CHEK2-201ENST00000328354 PSME1Q06323 249 aa18.48■□□□□ 0.55
CHEK2-201ENST00000328354 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
CHEK2-201ENST00000328354 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
CHEK2-201ENST00000328354 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
CHEK2-201ENST00000328354 SOX12O15370 315 aa18.48■□□□□ 0.55
CHEK2-201ENST00000328354 MST1RQ04912 1400 aa18.47■□□□□ 0.55
CHEK2-201ENST00000328354 AMPHP49418 695 aa18.47■□□□□ 0.55
CHEK2-201ENST00000328354 SULT6B1Q6IMI4 303 aa18.47■□□□□ 0.55
CHEK2-201ENST00000328354 KDRP35968 1356 aa18.47■□□□□ 0.55
CHEK2-201ENST00000328354 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
CHEK2-201ENST00000328354 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
CHEK2-201ENST00000328354 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.54
CHEK2-201ENST00000328354 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.54
CHEK2-201ENST00000328354 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.54
CHEK2-201ENST00000328354 TSHZ2Q9NRE2 1034 aa18.46■□□□□ 0.54
CHEK2-201ENST00000328354 SLIT3O75094 1523 aa18.45■□□□□ 0.54
CHEK2-201ENST00000328354 HOXC9P31274 260 aa18.45■□□□□ 0.54
CHEK2-201ENST00000328354 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
CHEK2-201ENST00000328354 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
CHEK2-201ENST00000328354 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
CHEK2-201ENST00000328354 FOXO3O43524 673 aa18.43■□□□□ 0.54
CHEK2-201ENST00000328354 ALS2Q96Q42 1657 aa18.43■□□□□ 0.54
CHEK2-201ENST00000328354 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
CHEK2-201ENST00000328354 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
CHEK2-201ENST00000328354 ATF3P18847 181 aa18.42■□□□□ 0.54
CHEK2-201ENST00000328354 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
CHEK2-201ENST00000328354 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
CHEK2-201ENST00000328354 EYA1Q99502 592 aa18.41■□□□□ 0.54
CHEK2-201ENST00000328354 IFT57Q9NWB7 429 aa18.41■□□□□ 0.54
CHEK2-201ENST00000328354 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
CHEK2-201ENST00000328354 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
CHEK2-201ENST00000328354 USP19O94966 1318 aa18.4■□□□□ 0.54
CHEK2-201ENST00000328354 GNAI1P63096 354 aa18.39■□□□□ 0.54
CHEK2-201ENST00000328354 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.54
CHEK2-201ENST00000328354 IP6K1Q92551 441 aa18.39■□□□□ 0.54
CHEK2-201ENST00000328354 MSH6P52701 1360 aa18.39■□□□□ 0.53
CHEK2-201ENST00000328354 ZNF428Q96B54 188 aa18.37■□□□□ 0.53
CHEK2-201ENST00000328354 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
CHEK2-201ENST00000328354 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
CHEK2-201ENST00000328354 XPCQ01831 940 aaPredicted RBP18.36■□□□□ 0.53
CHEK2-201ENST00000328354 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
CHEK2-201ENST00000328354 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
CHEK2-201ENST00000328354 GCP02774 474 aa18.35■□□□□ 0.53
CHEK2-201ENST00000328354 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
CHEK2-201ENST00000328354 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
CHEK2-201ENST00000328354 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
CHEK2-201ENST00000328354 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.53
CHEK2-201ENST00000328354 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.53
CHEK2-201ENST00000328354 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.53
CHEK2-201ENST00000328354 MBIPQ9NS73 344 aa18.33■□□□□ 0.53
CHEK2-201ENST00000328354 AAMPQ13685 434 aa18.33■□□□□ 0.52
CHEK2-201ENST00000328354 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
CHEK2-201ENST00000328354 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
CHEK2-201ENST00000328354 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.52
CHEK2-201ENST00000328354 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 UBAP1LF5GYI3 381 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
CHEK2-201ENST00000328354 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 LRRC37A3O60309 1634 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 PXDNQ92626 1479 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
CHEK2-201ENST00000328354 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 CRB1P82279 1406 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
CHEK2-201ENST00000328354 MS4A1P11836 297 aa18.31■□□□□ 0.52
CHEK2-201ENST00000328354 CRYBG1Q9Y4K1 1723 aa18.3■□□□□ 0.52
CHEK2-201ENST00000328354 VAMP4O75379 141 aa18.3■□□□□ 0.52
CHEK2-201ENST00000328354 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
CHEK2-201ENST00000328354 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
CHEK2-201ENST00000328354 CHL1O00533 1208 aa18.29■□□□□ 0.52
CHEK2-201ENST00000328354 RLBP1P12271 317 aa18.29■□□□□ 0.52
CHEK2-201ENST00000328354 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
CHEK2-201ENST00000328354 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms