RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
CACNA1C-201ENST00000327702 ERICH4A6NGS2 130 aa12.77□□□□□ -0.36
CACNA1C-201ENST00000327702 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-201ENST00000327702 ME1P48163 572 aa12.77□□□□□ -0.36
CACNA1C-201ENST00000327702 TICAM2Q86XR7 235 aa12.77□□□□□ -0.36
CACNA1C-201ENST00000327702 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
CACNA1C-201ENST00000327702 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
CACNA1C-201ENST00000327702 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 NEK4P51957 841 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 CEP57L1Q8IYX8 460 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 ZNF76P36508 570 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 STK3Q13188 491 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
CACNA1C-201ENST00000327702 FEZ1Q99689 392 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 DDX23Q9BUQ8 820 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 SMTNL1A8MU46 457 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 GNAI3P08754 354 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 SPATA24Q86W54 205 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 HMOX1P09601 288 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 NUP133Q8WUM0 1156 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 GCOM1H8Y6P7 765 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 MYZAPP0CAP1 466 aa12.75□□□□□ -0.37
CACNA1C-201ENST00000327702 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 MIA2Q96PC5 1412 aa12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 CDKL5O76039 1030 aa12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
CACNA1C-201ENST00000327702 USP47Q96K76 1375 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 GOPCQ9HD26 462 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 MCM3P25205 808 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 MAP9Q49MG5 647 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 CASQ1P31415 396 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 MICALCLQ6ZW33 695 aa12.73□□□□□ -0.37
CACNA1C-201ENST00000327702 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-201ENST00000327702 KRT85P78386 507 aa12.72□□□□□ -0.37
CACNA1C-201ENST00000327702 CFAP57Q96MR6 1250 aa12.72□□□□□ -0.37
CACNA1C-201ENST00000327702 SPA17Q15506 151 aa12.72□□□□□ -0.37
CACNA1C-201ENST00000327702 CEP131Q9UPN4 1083 aa12.72□□□□□ -0.37
CACNA1C-201ENST00000327702 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 IFFO1Q0D2I5 559 aa12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 PRKRIP1Q9H875 184 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-201ENST00000327702 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
CACNA1C-201ENST00000327702 SOGA1O94964 1423 aa12.71□□□□□ -0.38
CACNA1C-201ENST00000327702 TNIP1Q15025 636 aa12.71□□□□□ -0.38
CACNA1C-201ENST00000327702 UPF3BQ9BZI7 483 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-201ENST00000327702 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 WASF1Q92558 559 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 TSG101Q99816 390 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 GNAI2P04899 355 aa12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNA1C-201ENST00000327702 COMMD10Q9Y6G5 202 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 RNF187Q5TA31 235 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 FERP16591 822 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
CACNA1C-201ENST00000327702 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 UBXN4Q92575 508 aa12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 PABPN1LA6NDY0 278 aaKnown RBP12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 CTNNBL1Q8WYA6 563 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-201ENST00000327702 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
CACNA1C-201ENST00000327702 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
CACNA1C-201ENST00000327702 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
CACNA1C-201ENST00000327702 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-201ENST00000327702 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-201ENST00000327702 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms