RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 GDPD2Q9HCC8 539 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 ABCC1P33527 1531 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 TSC1Q92574 1164 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
CHRNA3-201ENST00000326828 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
CHRNA3-201ENST00000326828 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
CHRNA3-201ENST00000326828 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
CHRNA3-201ENST00000326828 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
CHRNA3-201ENST00000326828 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
CHRNA3-201ENST00000326828 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
CHRNA3-201ENST00000326828 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
CHRNA3-201ENST00000326828 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
CHRNA3-201ENST00000326828 ST18O60284 1047 aa17.55■□□□□ 0.4
CHRNA3-201ENST00000326828 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
CHRNA3-201ENST00000326828 DTNBO60941 627 aa17.54■□□□□ 0.4
CHRNA3-201ENST00000326828 SDSP20132 328 aa17.54■□□□□ 0.4
CHRNA3-201ENST00000326828 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.54■□□□□ 0.4
CHRNA3-201ENST00000326828 NEK4P51957 841 aa17.54■□□□□ 0.4
CHRNA3-201ENST00000326828 ZNF445P59923 1031 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 ZFYVE16Q7Z3T8 1539 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 NOL7Q9UMY1 257 aaKnown RBP17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 MYOM2P54296 1465 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 IL16Q14005 1332 aa17.53■□□□□ 0.4
CHRNA3-201ENST00000326828 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.4
CHRNA3-201ENST00000326828 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
CHRNA3-201ENST00000326828 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
CHRNA3-201ENST00000326828 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
CHRNA3-201ENST00000326828 C17orf53Q8N3J3 647 aaPredicted RBP17.51■□□□□ 0.39
CHRNA3-201ENST00000326828 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
CHRNA3-201ENST00000326828 TET3O43151 1660 aa17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 ZKSCAN5Q9Y2L8 839 aa17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 FCHSD2O94868 740 aa17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 FANCAO15360 1455 aa17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
CHRNA3-201ENST00000326828 SOX12O15370 315 aa17.49■□□□□ 0.39
CHRNA3-201ENST00000326828 NFE2L2Q16236 605 aa17.49■□□□□ 0.39
CHRNA3-201ENST00000326828 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
CHRNA3-201ENST00000326828 MROH2AA6NES4 1674 aa17.49■□□□□ 0.39
CHRNA3-201ENST00000326828 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
CHRNA3-201ENST00000326828 GNAI1P63096 354 aa17.48■□□□□ 0.39
CHRNA3-201ENST00000326828 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
CHRNA3-201ENST00000326828 UPF3BQ9BZI7 483 aaKnown RBP17.48■□□□□ 0.39
CHRNA3-201ENST00000326828 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
CHRNA3-201ENST00000326828 LRSAM1Q6UWE0 723 aa17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 KIF1BO60333 1816 aa17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 NSD2O96028 1365 aa17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
CHRNA3-201ENST00000326828 SHROOM2Q13796 1616 aa17.46■□□□□ 0.39
CHRNA3-201ENST00000326828 RILPL2Q969X0 211 aa17.46■□□□□ 0.39
CHRNA3-201ENST00000326828 MEIS3Q99687 375 aa17.46■□□□□ 0.39
CHRNA3-201ENST00000326828 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
CHRNA3-201ENST00000326828 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
CHRNA3-201ENST00000326828 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.38
CHRNA3-201ENST00000326828 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 TRIM6-TRIM34B2RNG4 842 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 CLEC17AQ6ZS10 378 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
CHRNA3-201ENST00000326828 ZNF500O60304 480 aaPredicted RBP17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 PDLIM2Q96JY6 352 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 CWC22Q9HCG8 908 aaKnown RBP17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 ABCC4O15439 1325 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 GADD45BO75293 160 aaPredicted RBP17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 REC8O95072 547 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 NPATQ14207 1427 aa17.44■□□□□ 0.38
CHRNA3-201ENST00000326828 F6X3S4 739 aa17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 IDI1Q13907 227 aa17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 MCM10Q7L590 875 aa17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 USP25Q9UHP3 1055 aa17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 NME9Q86XW9 330 aa17.43■□□□□ 0.38
CHRNA3-201ENST00000326828 ERC2O15083 957 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHRNA3-201ENST00000326828 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms