RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 FGD5Q6ZNL6 1462 aa7.46□□□□□ -1.21
SSH1-202ENST00000326495 SSR1P43307 286 aaKnown RBP7.46□□□□□ -1.21
SSH1-202ENST00000326495 SPATA24Q86W54 205 aa7.46□□□□□ -1.21
SSH1-202ENST00000326495 PHAXQ9H814 394 aaKnown RBP7.46□□□□□ -1.21
SSH1-202ENST00000326495 PPP1R12BO60237 982 aaPredicted RBP7.46□□□□□ -1.21
SSH1-202ENST00000326495 ESPNB1AK53 854 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 KIF20AO95235 890 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 CEP131Q9UPN4 1083 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 SMTNL1A8MU46 457 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSH1-202ENST00000326495 CTDP1Q9Y5B0 961 aaPredicted RBP7.46□□□□□ -1.22
SSH1-202ENST00000326495 FYB1O15117 783 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 VPS36Q86VN1 386 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 EHBP1Q8NDI1 1231 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 BACH2Q9BYV9 841 aa7.46□□□□□ -1.22
SSH1-202ENST00000326495 CACNA1FO60840 1977 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 APAF1O14727 1248 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 HSP90AB2PQ58FF8 381 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 PPP6R1Q9UPN7 881 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 CCAR1Q8IX12 1150 aaKnown RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 CALCOCO1Q9P1Z2 691 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 AXDND1Q5T1B0 1012 aaPredicted RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 VPS37DQ86XT2 251 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 ABCC11Q96J66 1382 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 EIF2AK4Q9P2K8 1649 aaKnown RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 GNL3LQ9NVN8 582 aaKnown RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 TBC1D2BQ9UPU7 963 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 PDE4CQ08493 712 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 CLASRPQ8N2M8 674 aaKnown RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 ZSCAN31Q96LW9 406 aaPredicted RBP7.45□□□□□ -1.22
SSH1-202ENST00000326495 DYDC1Q8WWB3 177 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 CTNNA3Q9UI47 895 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 POTEJP0CG39 1038 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 TRIM22Q8IYM9 498 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 ARHGAP5Q13017 1502 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 PPP4R3BQ5MIZ7 849 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 PDILTQ8N807 584 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 USH1CQ9Y6N9 552 aa7.45□□□□□ -1.22
SSH1-202ENST00000326495 TAOK3Q9H2K8 898 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 TNMDQ9H2S6 317 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 TRHP20396 242 aaPredicted RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 SEPT7Q16181 437 aaKnown RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 STAMBPO95630 424 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 FKBP5Q13451 457 aaPredicted RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 ZNF397Q8NF99 534 aaPredicted RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 HMGXB3Q12766 1538 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 UBTFL1P0CB47 393 aaPredicted RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 SETSIPP0DME0 302 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 KRT85P78386 507 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 PAIP2Q9BPZ3 127 aaKnown RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 DNAAF4Q8WXU2 420 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 JAKMIP3Q5VZ66 844 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 KLHL34Q8N239 644 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 CCT4P50991 539 aaKnown RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 BMP2KQ9NSY1 1161 aaPredicted RBP7.44□□□□□ -1.22
SSH1-202ENST00000326495 CCDC196A0A1B0GTZ2 297 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 GSDMDP57764 484 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 PLVAPQ9BX97 442 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 NCOA2Q15596 1464 aa7.44□□□□□ -1.22
SSH1-202ENST00000326495 TRAF1Q13077 416 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 LRRCC1Q9C099 1032 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 LNPKQ9C0E8 428 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 HNRNPMP52272 730 aaKnown RBP eCLIP7.43□□□□□ -1.227e-6■■□□□ 14.2
SSH1-202ENST00000326495 WDR63Q8IWG1 891 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 ANKRD50Q9ULJ7 1429 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 BBXQ8WY36 941 aaPredicted RBP7.43□□□□□ -1.22
SSH1-202ENST00000326495 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 ZSCAN12O43309 604 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 FERMT1Q9BQL6 677 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 TRAK1Q9UPV9 953 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 SNAPC4Q5SXM2 1469 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 PTPRGP23470 1445 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 ANKRD18BA2A2Z9 1011 aa7.43□□□□□ -1.22
SSH1-202ENST00000326495 CASTP20810 708 aaKnown RBP7.43□□□□□ -1.22
SSH1-202ENST00000326495 AQRO60306 1485 aaKnown RBP eCLIP7.42□□□□□ -1.22
SSH1-202ENST00000326495 NACAP1Q9BZK3 213 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 PDCL3Q9H2J4 239 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 RAB34Q9BZG1 259 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 UNC13AQ9UPW8 1703 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 CGNQ9P2M7 1197 aaKnown RBP7.42□□□□□ -1.22
SSH1-202ENST00000326495 SCAND2PQ9GZW5 306 aaPredicted RBP7.42□□□□□ -1.22
SSH1-202ENST00000326495 RPGRIP1LQ68CZ1 1315 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
SSH1-202ENST00000326495 CCDC30Q5VVM6 783 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 CEP128Q6ZU80 1094 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 CEP57L1Q8IYX8 460 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 KIF18AQ8NI77 898 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 NSD2O96028 1365 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 NKTRP30414 1462 aaKnown RBP7.42□□□□□ -1.22
SSH1-202ENST00000326495 SERPINC1P01008 464 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 RNF214Q8ND24 703 aa7.42□□□□□ -1.22
SSH1-202ENST00000326495 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms