RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
LIN28A-202ENST00000326279 NPHP4O75161 1426 aaPredicted RBP16.46■□□□□ 0.23
LIN28A-202ENST00000326279 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.22
LIN28A-202ENST00000326279 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 RNF17Q9BXT8 1623 aaKnown RBP16.45■□□□□ 0.22
LIN28A-202ENST00000326279 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 F6X3S4 739 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
LIN28A-202ENST00000326279 E9PCH4 1651 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
LIN28A-202ENST00000326279 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 TET3O43151 1660 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
LIN28A-202ENST00000326279 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
LIN28A-202ENST00000326279 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
LIN28A-202ENST00000326279 HOXC9P31274 260 aa16.43■□□□□ 0.22
LIN28A-202ENST00000326279 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
LIN28A-202ENST00000326279 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
LIN28A-202ENST00000326279 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
LIN28A-202ENST00000326279 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
LIN28A-202ENST00000326279 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
LIN28A-202ENST00000326279 PPRC1Q5VV67 1664 aaKnown RBP16.42■□□□□ 0.22
LIN28A-202ENST00000326279 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
LIN28A-202ENST00000326279 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
LIN28A-202ENST00000326279 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
LIN28A-202ENST00000326279 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
LIN28A-202ENST00000326279 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
LIN28A-202ENST00000326279 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
LIN28A-202ENST00000326279 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
LIN28A-202ENST00000326279 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
LIN28A-202ENST00000326279 TSPYL6Q8N831 410 aa16.4■□□□□ 0.22
LIN28A-202ENST00000326279 UNC13BO14795 1591 aa16.4■□□□□ 0.22
LIN28A-202ENST00000326279 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
LIN28A-202ENST00000326279 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
LIN28A-202ENST00000326279 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
LIN28A-202ENST00000326279 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
LIN28A-202ENST00000326279 KDM5CP41229 1560 aa16.39■□□□□ 0.21
LIN28A-202ENST00000326279 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
LIN28A-202ENST00000326279 NLRP1Q9C000 1473 aa16.39■□□□□ 0.21
LIN28A-202ENST00000326279 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
LIN28A-202ENST00000326279 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
LIN28A-202ENST00000326279 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
LIN28A-202ENST00000326279 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 KLHL34Q8N239 644 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
LIN28A-202ENST00000326279 KIF1BO60333 1816 aa16.37■□□□□ 0.21
LIN28A-202ENST00000326279 EXOC5O00471 708 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
LIN28A-202ENST00000326279 IL13P35225 146 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 FAM182BQ5T319 152 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
LIN28A-202ENST00000326279 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 BICDL1Q6ZP65 573 aa16.36■□□□□ 0.21
LIN28A-202ENST00000326279 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
LIN28A-202ENST00000326279 PDZRN3Q9UPQ7 1066 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 NSD2O96028 1365 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 KCNJ4P48050 445 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 IP6K1Q92551 441 aa16.35■□□□□ 0.21
LIN28A-202ENST00000326279 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
LIN28A-202ENST00000326279 HMMRO75330 724 aa16.34■□□□□ 0.21
LIN28A-202ENST00000326279 MYOM2P54296 1465 aa16.34■□□□□ 0.21
LIN28A-202ENST00000326279 FLT4P35916 1363 aa16.34■□□□□ 0.21
LIN28A-202ENST00000326279 GLI2P10070 1586 aa16.34■□□□□ 0.21
LIN28A-202ENST00000326279 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
LIN28A-202ENST00000326279 MAP3K4Q9Y6R4 1608 aa16.32■□□□□ 0.2
LIN28A-202ENST00000326279 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
LIN28A-202ENST00000326279 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
LIN28A-202ENST00000326279 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
LIN28A-202ENST00000326279 SIL1Q9H173 461 aa16.32■□□□□ 0.2
LIN28A-202ENST00000326279 EDC4Q6P2E9 1401 aaKnown RBP16.32■□□□□ 0.2
LIN28A-202ENST00000326279 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
LIN28A-202ENST00000326279 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
LIN28A-202ENST00000326279 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
LIN28A-202ENST00000326279 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
LIN28A-202ENST00000326279 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
LIN28A-202ENST00000326279 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
LIN28A-202ENST00000326279 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
LIN28A-202ENST00000326279 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
LIN28A-202ENST00000326279 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
LIN28A-202ENST00000326279 PTPRMP28827 1452 aa16.3■□□□□ 0.2
LIN28A-202ENST00000326279 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
LIN28A-202ENST00000326279 TRIM27P14373 513 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms