RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CCDC69A6NI79 296 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 DEF6Q9H4E7 631 aa24.9■■□□□ 1.58
RNF40-201ENST00000324685 GRPEL1Q9HAV7 217 aa24.89■■□□□ 1.58
RNF40-201ENST00000324685 KIF21BO75037 1637 aa24.89■■□□□ 1.58
RNF40-201ENST00000324685 EIF3JO75822 258 aaKnown RBP24.89■■□□□ 1.58
RNF40-201ENST00000324685 CASKIN1Q8WXD9 1431 aa24.89■■□□□ 1.58
RNF40-201ENST00000324685 BRPF3Q9ULD4 1205 aa24.89■■□□□ 1.58
RNF40-201ENST00000324685 ZSCAN31Q96LW9 406 aaPredicted RBP24.89■■□□□ 1.58
RNF40-201ENST00000324685 ANKRD18AQ8IVF6 992 aa24.89■■□□□ 1.57
RNF40-201ENST00000324685 NOL7Q9UMY1 257 aaKnown RBP24.89■■□□□ 1.57
RNF40-201ENST00000324685 HDGFL1Q5TGJ6 251 aa24.88■■□□□ 1.57
RNF40-201ENST00000324685 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
RNF40-201ENST00000324685 CIZ1Q9ULV3 898 aaPredicted RBP24.88■■□□□ 1.57
RNF40-201ENST00000324685 HFM1A2PYH4 1435 aa24.88■■□□□ 1.57
RNF40-201ENST00000324685 ARHGAP5Q13017 1502 aa24.88■■□□□ 1.57
RNF40-201ENST00000324685 CDKL5O76039 1030 aa24.87■■□□□ 1.57
RNF40-201ENST00000324685 KIAA0754O94854 1291 aa24.87■■□□□ 1.57
RNF40-201ENST00000324685 BACH2Q9BYV9 841 aa24.87■■□□□ 1.57
RNF40-201ENST00000324685 STK3Q13188 491 aa24.87■■□□□ 1.57
RNF40-201ENST00000324685 IQCEQ6IPM2 695 aa24.87■■□□□ 1.57
RNF40-201ENST00000324685 PDIA4P13667 645 aaKnown RBP24.87■■□□□ 1.57
RNF40-201ENST00000324685 LARP1BQ659C4 914 aaKnown RBP24.87■■□□□ 1.57
RNF40-201ENST00000324685 TATP17735 454 aaPredicted RBP24.86■■□□□ 1.57
RNF40-201ENST00000324685 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
RNF40-201ENST00000324685 MVPQ14764 893 aaKnown RBP24.86■■□□□ 1.57
RNF40-201ENST00000324685 CFAP70Q5T0N1 1121 aa24.86■■□□□ 1.57
RNF40-201ENST00000324685 NEFHP12036 1026 aa24.86■■□□□ 1.57
RNF40-201ENST00000324685 GOLGA6L7A0A1B0GV03 622 aa24.85■■□□□ 1.57
RNF40-201ENST00000324685 RBM42Q9BTD8 480 aaKnown RBP24.85■■□□□ 1.57
RNF40-201ENST00000324685 TSR2Q969E8 191 aaKnown RBP24.85■■□□□ 1.57
RNF40-201ENST00000324685 BCAR3O75815 825 aa24.85■■□□□ 1.57
RNF40-201ENST00000324685 CHD1LQ86WJ1 897 aa24.85■■□□□ 1.57
RNF40-201ENST00000324685 RBM10P98175 930 aaKnown RBP24.84■■□□□ 1.57
RNF40-201ENST00000324685 CFAP45Q9UL16 551 aa24.84■■□□□ 1.57
RNF40-201ENST00000324685 FAM177BA6PVY3 158 aa24.84■■□□□ 1.57
RNF40-201ENST00000324685 ATF7IPQ6VMQ6 1270 aa24.84■■□□□ 1.57
RNF40-201ENST00000324685 CCDC57Q2TAC2 916 aa24.84■■□□□ 1.57
RNF40-201ENST00000324685 SEPT7Q16181 437 aaKnown RBP24.83■■□□□ 1.57
RNF40-201ENST00000324685 SOGA3Q5TF21 947 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 SPATA32Q96LK8 384 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 PDCL3Q9H2J4 239 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 PDRG1Q9NUG6 133 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 CEP57L1Q8IYX8 460 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 TANGO6Q9C0B7 1094 aa24.83■■□□□ 1.57
RNF40-201ENST00000324685 BLOC1S2Q6QNY1 142 aa24.82■■□□□ 1.56
RNF40-201ENST00000324685 FAM69CQ0P6D2 419 aa24.82■■□□□ 1.56
RNF40-201ENST00000324685 PPP6R1Q9UPN7 881 aa24.82■■□□□ 1.56
RNF40-201ENST00000324685 ZNF692Q9BU19 519 aaPredicted RBP24.82■■□□□ 1.56
RNF40-201ENST00000324685 KRT32Q14532 448 aa24.81■■□□□ 1.56
RNF40-201ENST00000324685 CTNNA3Q9UI47 895 aa24.81■■□□□ 1.56
RNF40-201ENST00000324685 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
RNF40-201ENST00000324685 NUP62CLQ9H1M0 184 aa24.81■■□□□ 1.56
RNF40-201ENST00000324685 SMTNL1A8MU46 457 aa24.8■■□□□ 1.56
RNF40-201ENST00000324685 ESCO1Q5FWF5 840 aa24.8■■□□□ 1.56
RNF40-201ENST00000324685 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
RNF40-201ENST00000324685 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
RNF40-201ENST00000324685 UQCRHLA0A096LP55 91 aa24.79■■□□□ 1.56
RNF40-201ENST00000324685 UQCRHP07919 91 aa24.79■■□□□ 1.56
RNF40-201ENST00000324685 SULT6B1Q6IMI4 303 aa24.78■■□□□ 1.56
RNF40-201ENST00000324685 CABP4P57796 275 aa24.78■■□□□ 1.56
RNF40-201ENST00000324685 SIL1Q9H173 461 aa24.78■■□□□ 1.56
RNF40-201ENST00000324685 WASF1Q92558 559 aa24.78■■□□□ 1.56
RNF40-201ENST00000324685 AACSQ86V21 672 aa24.77■■□□□ 1.56
RNF40-201ENST00000324685 MAP4K4O95819 1239 aaPredicted RBP24.77■■□□□ 1.56
RNF40-201ENST00000324685 PAF1Q8N7H5 531 aa24.77■■□□□ 1.56
RNF40-201ENST00000324685 NUP133Q8WUM0 1156 aa24.77■■□□□ 1.56
RNF40-201ENST00000324685 ZHX3Q9H4I2 956 aa24.77■■□□□ 1.56
RNF40-201ENST00000324685 BMP2KQ9NSY1 1161 aaPredicted RBP24.76■■□□□ 1.55
RNF40-201ENST00000324685 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
RNF40-201ENST00000324685 UPF3BQ9BZI7 483 aaKnown RBP24.76■■□□□ 1.55
RNF40-201ENST00000324685 ENOX2Q16206 610 aaKnown RBP24.76■■□□□ 1.55
RNF40-201ENST00000324685 ZNF428Q96B54 188 aa24.76■■□□□ 1.55
RNF40-201ENST00000324685 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
RNF40-201ENST00000324685 KIAA1107Q9UPP5 1409 aa24.75■■□□□ 1.55
RNF40-201ENST00000324685 ATP2B2Q01814 1243 aa24.75■■□□□ 1.55
RNF40-201ENST00000324685 CDK19Q9BWU1 502 aa24.74■■□□□ 1.55
RNF40-201ENST00000324685 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
RNF40-201ENST00000324685 RPAP2Q8IXW5 612 aaPredicted RBP24.74■■□□□ 1.55
RNF40-201ENST00000324685 MCM4P33991 863 aa24.74■■□□□ 1.55
RNF40-201ENST00000324685 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
RNF40-201ENST00000324685 ANKRD62A6NC57 917 aa24.73■■□□□ 1.55
RNF40-201ENST00000324685 ZNF530Q6P9A1 599 aaPredicted RBP24.73■■□□□ 1.55
RNF40-201ENST00000324685 PLCD4Q9BRC7 762 aa24.73■■□□□ 1.55
RNF40-201ENST00000324685 FAM177A1Q8N128 213 aaPredicted RBP24.72■■□□□ 1.55
RNF40-201ENST00000324685 UBAC1Q9BSL1 405 aa24.72■■□□□ 1.55
RNF40-201ENST00000324685 USP8P40818 1118 aa24.72■■□□□ 1.55
RNF40-201ENST00000324685 CEP131Q9UPN4 1083 aa24.72■■□□□ 1.55
RNF40-201ENST00000324685 HSP90AB3PQ58FF7 597 aa24.72■■□□□ 1.55
RNF40-201ENST00000324685 MPHOSPH8Q99549 860 aa24.72■■□□□ 1.55
RNF40-201ENST00000324685 TXNDC2Q86VQ3 553 aa24.71■■□□□ 1.55
RNF40-201ENST00000324685 SRGAP3O43295 1099 aa24.71■■□□□ 1.55
RNF40-201ENST00000324685 EZRP15311 586 aaKnown RBP24.71■■□□□ 1.55
RNF40-201ENST00000324685 EPB41L2O43491 1005 aaKnown RBP24.7■■□□□ 1.54
RNF40-201ENST00000324685 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 FKBP4Q02790 459 aaKnown RBP eCLIP24.7■■□□□ 1.54
RNF40-201ENST00000324685 MAP3K11Q16584 847 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 PLEKHH2Q8IVE3 1493 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 KIF2AO00139 706 aaPredicted RBP24.7■■□□□ 1.54
RNF40-201ENST00000324685 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 CWC27Q6UX04 472 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms