RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 NUTM2BA6NNL0 878 aaPredicted RBP9.13□□□□□ -0.95
MRE11-201ENST00000323929 NUTM2EB1AL46 878 aaPredicted RBP9.13□□□□□ -0.95
MRE11-201ENST00000323929 CPLX1O14810 134 aa9.13□□□□□ -0.95
MRE11-201ENST00000323929 TTC39AQ5SRH9 613 aa9.13□□□□□ -0.95
MRE11-201ENST00000323929 NUTM2AQ8IVF1 878 aaPredicted RBP9.13□□□□□ -0.95
MRE11-201ENST00000323929 NKTRP30414 1462 aaKnown RBP9.13□□□□□ -0.95
MRE11-201ENST00000323929 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
MRE11-201ENST00000323929 FSD1Q9BTV5 496 aa9.13□□□□□ -0.95
MRE11-201ENST00000323929 C22orf23Q9BZE7 217 aa9.13□□□□□ -0.95
MRE11-201ENST00000323929 SURF6O75683 361 aaKnown RBP9.12□□□□□ -0.95
MRE11-201ENST00000323929 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 NME9Q86XW9 330 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 DDX54Q8TDD1 881 aaKnown RBP9.12□□□□□ -0.95
MRE11-201ENST00000323929 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
MRE11-201ENST00000323929 TPM2P07951 284 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 NUCB2P80303 420 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 WASHC4Q2M389 1173 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 ZFYVE16Q7Z3T8 1539 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 ABCA8O94911 1581 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■□□□ 12.5
MRE11-201ENST00000323929 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
MRE11-201ENST00000323929 LRRCC1Q9C099 1032 aa9.12□□□□□ -0.95
MRE11-201ENST00000323929 HOOK1Q9UJC3 728 aaKnown RBP9.12□□□□□ -0.95
MRE11-201ENST00000323929 MSH6P52701 1360 aa9.11□□□□□ -0.95
MRE11-201ENST00000323929 RALYLQ86SE5 291 aaKnown RBP9.11□□□□□ -0.95
MRE11-201ENST00000323929 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
MRE11-201ENST00000323929 PPIP5K1Q6PFW1 1433 aa9.11□□□□□ -0.95
MRE11-201ENST00000323929 SLC3A2P08195 630 aaKnown RBP9.11□□□□□ -0.95
MRE11-201ENST00000323929 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
MRE11-201ENST00000323929 CCDC47Q96A33 483 aaKnown RBP9.11□□□□□ -0.95
MRE11-201ENST00000323929 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
MRE11-201ENST00000323929 ANO8Q9HCE9 1232 aaPredicted RBP9.11□□□□□ -0.95
MRE11-201ENST00000323929 CNNM1Q9NRU3 951 aa9.11□□□□□ -0.95
MRE11-201ENST00000323929 TRPM2O94759 1503 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 ZSCAN25Q6NSZ9 544 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 ABCC1P33527 1531 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 BCAR3O75815 825 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 STARD3NLO95772 234 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
MRE11-201ENST00000323929 UHRF1BP1Q6BDS2 1440 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 MCM2P49736 904 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 MCTP1Q6DN14 999 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 KRT28Q7Z3Y7 464 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.1□□□□□ -0.95
MRE11-201ENST00000323929 PIP4K2BP78356 416 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 PZPP20742 1482 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
MRE11-201ENST00000323929 BRMS1Q9HCU9 246 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 IL16Q14005 1332 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 TAF7Q15545 349 aaPredicted RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 RPAP2Q8IXW5 612 aaPredicted RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 TMOD3Q9NYL9 352 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 SART3Q15020 963 aaKnown RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 SAFBQ15424 915 aaKnown RBP eCLIP9.09□□□□□ -0.95
MRE11-201ENST00000323929 ZFYVE9O95405 1425 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 TPD52L1Q16890 204 aaPredicted RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 DNAJC2Q99543 621 aaKnown RBP9.09□□□□□ -0.95
MRE11-201ENST00000323929 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
MRE11-201ENST00000323929 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.96
MRE11-201ENST00000323929 XBP1P17861 261 aa9.08□□□□□ -0.96
MRE11-201ENST00000323929 ACEP12821 1306 aa9.08□□□□□ -0.96
MRE11-201ENST00000323929 DDX49Q9Y6V7 483 aaKnown RBP9.08□□□□□ -0.96
MRE11-201ENST00000323929 MYL6BP14649 208 aa9.08□□□□□ -0.96
MRE11-201ENST00000323929 RABEP1Q15276 862 aa9.08□□□□□ -0.96
MRE11-201ENST00000323929 PHF23Q9BUL5 403 aaPredicted RBP9.08□□□□□ -0.96
MRE11-201ENST00000323929 ZNF652Q9Y2D9 606 aa9.08□□□□□ -0.96
MRE11-201ENST00000323929 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
MRE11-201ENST00000323929 CCDC57Q2TAC2 916 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 DUSP27Q5VZP5 1158 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 C1orf115Q9H7X2 142 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 ZMYM3Q14202 1370 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 RAB11FIP3O75154 756 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 PTPRCP08575 1304 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 DHX16O60231 1041 aaKnown RBP9.07□□□□□ -0.96
MRE11-201ENST00000323929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.07□□□□□ -0.96
MRE11-201ENST00000323929 GOLGA6L19H0YKK7 550 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 CHD1O14646 1710 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 CHD1LQ86WJ1 897 aa9.07□□□□□ -0.96
MRE11-201ENST00000323929 HSP90AB3PQ58FF7 597 aa9.06□□□□□ -0.96
MRE11-201ENST00000323929 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
MRE11-201ENST00000323929 TPM1P09493 284 aa9.06□□□□□ -0.96
MRE11-201ENST00000323929 RAD21O60216 631 aa9.06□□□□□ -0.96
MRE11-201ENST00000323929 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
MRE11-201ENST00000323929 ANKRD1Q15327 319 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 TEX13AQ9BXU3 409 aaPredicted RBP9.05□□□□□ -0.96
MRE11-201ENST00000323929 MCM10Q7L590 875 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 NACAP1Q9BZK3 213 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 PLXNC1O60486 1568 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 YTHDC2Q9H6S0 1430 aaKnown RBP9.05□□□□□ -0.96
MRE11-201ENST00000323929 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 CCDC184Q52MB2 194 aa9.05□□□□□ -0.96
MRE11-201ENST00000323929 ZCCHC11Q5TAX3 1644 aaKnown RBP9.04□□□□□ -0.96
MRE11-201ENST00000323929 FYB1O15117 783 aa9.04□□□□□ -0.96
MRE11-201ENST00000323929 TPM3P06753 285 aa9.04□□□□□ -0.96
MRE11-201ENST00000323929 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms