RNA–Protein interactions for RNA: ENST00000323076.6

LCP1-201, Transcript of lymphocyte cytosolic protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCP1, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-201ENST00000323076 ATP2B3Q16720 1220 aa8.85□□□□□ -0.99
LCP1-201ENST00000323076 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.85□□□□□ -0.99
LCP1-201ENST00000323076 MYH16Q9H6N6 1097 aa8.85□□□□□ -0.99
LCP1-201ENST00000323076 CCDC144AA2RUR9 1427 aa8.85□□□□□ -0.99
LCP1-201ENST00000323076 NPC1L1Q9UHC9 1359 aa8.84□□□□□ -0.99
LCP1-201ENST00000323076 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
LCP1-201ENST00000323076 TULP2O00295 520 aa8.84□□□□□ -0.99
LCP1-201ENST00000323076 RNF217Q8TC41 542 aa8.84□□□□□ -0.99
LCP1-201ENST00000323076 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
LCP1-201ENST00000323076 CEP120Q8N960 986 aa8.84□□□□□ -0.99
LCP1-201ENST00000323076 TNRQ92752 1358 aa8.83□□□□□ -1
LCP1-201ENST00000323076 TSPY4P0CV99 314 aa8.83□□□□□ -1
LCP1-201ENST00000323076 TSPY10P0CW01 314 aa8.83□□□□□ -1
LCP1-201ENST00000323076 MS4A1P11836 297 aa8.83□□□□□ -1
LCP1-201ENST00000323076 ZNF526Q8TF50 670 aaPredicted RBP8.83□□□□□ -1
LCP1-201ENST00000323076 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
LCP1-201ENST00000323076 ALS2Q96Q42 1657 aa8.83□□□□□ -1
LCP1-201ENST00000323076 ZNF500O60304 480 aaPredicted RBP8.83□□□□□ -1
LCP1-201ENST00000323076 LMOD3Q0VAK6 560 aa8.83□□□□□ -1
LCP1-201ENST00000323076 MRE11P49959 708 aa8.82□□□□□ -1
LCP1-201ENST00000323076 TRIM44Q96DX7 344 aaPredicted RBP8.82□□□□□ -1
LCP1-201ENST00000323076 BORCS6Q96GS4 357 aa8.82□□□□□ -1
LCP1-201ENST00000323076 RNF123Q5XPI4 1314 aa8.82□□□□□ -1
LCP1-201ENST00000323076 ANAPC15P60006 121 aa8.82□□□□□ -1
LCP1-201ENST00000323076 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
LCP1-201ENST00000323076 MED1Q15648 1581 aaPredicted RBP8.81□□□□□ -1
LCP1-201ENST00000323076 ATP1B4Q9UN42 357 aaPredicted RBP8.81□□□□□ -1
LCP1-201ENST00000323076 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
LCP1-201ENST00000323076 GPATCH11Q8N954 259 aa8.81□□□□□ -1
LCP1-201ENST00000323076 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
LCP1-201ENST00000323076 NUP155O75694 1391 aa8.8□□□□□ -1
LCP1-201ENST00000323076 NCOA3Q9Y6Q9 1424 aa8.8□□□□□ -1
LCP1-201ENST00000323076 SETQ01105 290 aaPredicted RBP8.79□□□□□ -1
LCP1-201ENST00000323076 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
LCP1-201ENST00000323076 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
LCP1-201ENST00000323076 SHANK3Q9BYB0 1731 aa8.79□□□□□ -1
LCP1-201ENST00000323076 KANK1Q14678 1352 aa8.79□□□□□ -1
LCP1-201ENST00000323076 PKD2Q13563 968 aa8.79□□□□□ -1
LCP1-201ENST00000323076 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
LCP1-201ENST00000323076 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
LCP1-201ENST00000323076 NKTRP30414 1462 aaKnown RBP8.79□□□□□ -1
LCP1-201ENST00000323076 DLG5Q8TDM6 1919 aa8.79□□□□□ -1
LCP1-201ENST00000323076 GLI3P10071 1580 aa8.78□□□□□ -1
LCP1-201ENST00000323076 SATB1Q01826 763 aa8.78□□□□□ -1
LCP1-201ENST00000323076 NBPF11Q86T75 865 aa8.78□□□□□ -1
LCP1-201ENST00000323076 PARP4Q9UKK3 1724 aaKnown RBP8.78□□□□□ -1
LCP1-201ENST00000323076 CEP83Q9Y592 693 aa8.78□□□□□ -1
LCP1-201ENST00000323076 GOLIM4O00461 696 aa8.78□□□□□ -1
LCP1-201ENST00000323076 MAP2K1Q02750 393 aaPredicted RBP8.78□□□□□ -1
LCP1-201ENST00000323076 SGSM3Q96HU1 749 aa8.78□□□□□ -1
LCP1-201ENST00000323076 SCAF11Q99590 1463 aaKnown RBP8.78□□□□□ -1
LCP1-201ENST00000323076 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
LCP1-201ENST00000323076 ZSCAN30Q86W11 494 aa8.78□□□□□ -1
LCP1-201ENST00000323076 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
LCP1-201ENST00000323076 COL18A1P39060 1754 aa8.78□□□□□ -1
LCP1-201ENST00000323076 CDK12Q9NYV4 1490 aaPredicted RBP8.77□□□□□ -1
LCP1-201ENST00000323076 PAPPAQ13219 1627 aa8.77□□□□□ -1.01
LCP1-201ENST00000323076 JARID2Q92833 1246 aaPredicted RBP8.77□□□□□ -1.01
LCP1-201ENST00000323076 EFCC1Q9HA90 598 aa8.77□□□□□ -1.01
LCP1-201ENST00000323076 RGPD8O14715 1765 aaPredicted RBP8.77□□□□□ -1.01
LCP1-201ENST00000323076 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.76□□□□□ -1.01
LCP1-201ENST00000323076 ZNF771Q7L3S4 317 aaPredicted RBP8.76□□□□□ -1.01
LCP1-201ENST00000323076 KTN1Q86UP2 1357 aaKnown RBP8.76□□□□□ -1.01
LCP1-201ENST00000323076 PIK3R4Q99570 1358 aa8.76□□□□□ -1.01
LCP1-201ENST00000323076 TIGD1Q96MW7 591 aa8.76□□□□□ -1.01
LCP1-201ENST00000323076 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
LCP1-201ENST00000323076 TTC36A6NLP5 189 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 MPHOSPH9Q99550 1183 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 PARD3Q8TEW0 1356 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 CC2D2BQ6DHV5 1058 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 PLEKHG1Q9ULL1 1385 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 CCDC172P0C7W6 258 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 TMEM2Q9UHN6 1383 aa8.75□□□□□ -1.01
LCP1-201ENST00000323076 SPDYE4A6NLX3 237 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 MAFGO15525 162 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 MYCBPQ99417 103 aaPredicted RBP8.74□□□□□ -1.01
LCP1-201ENST00000323076 NOP2P46087 812 aaKnown RBP8.74□□□□□ -1.01
LCP1-201ENST00000323076 FEZ2Q9UHY8 353 aaPredicted RBP8.74□□□□□ -1.01
LCP1-201ENST00000323076 KIF3BO15066 747 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 NCAPGQ9BPX3 1015 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 PANK3Q9H999 370 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
LCP1-201ENST00000323076 NPHP4O75161 1426 aaPredicted RBP8.73□□□□□ -1.01
LCP1-201ENST00000323076 FAM208AQ9UK61 1670 aaKnown RBP8.73□□□□□ -1.01
LCP1-201ENST00000323076 DNAJC21Q5F1R6 531 aaKnown RBP8.73□□□□□ -1.01
LCP1-201ENST00000323076 DNAJC14Q6Y2X3 702 aaPredicted RBP8.73□□□□□ -1.01
LCP1-201ENST00000323076 SMC4Q9NTJ3 1288 aa8.73□□□□□ -1.01
LCP1-201ENST00000323076 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
LCP1-201ENST00000323076 NBPF9Q3BBW0 867 aa8.73□□□□□ -1.01
LCP1-201ENST00000323076 RAI14Q9P0K7 980 aa8.73□□□□□ -1.01
LCP1-201ENST00000323076 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
LCP1-201ENST00000323076 DMRT2Q9Y5R5 561 aa8.73□□□□□ -1.01
LCP1-201ENST00000323076 NCAPD2Q15021 1401 aa8.72□□□□□ -1.01
LCP1-201ENST00000323076 SSH2Q76I76 1423 aa8.72□□□□□ -1.01
LCP1-201ENST00000323076 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
LCP1-201ENST00000323076 XPCQ01831 940 aaPredicted RBP8.72□□□□□ -1.01
LCP1-201ENST00000323076 TSC1Q92574 1164 aa8.72□□□□□ -1.01
LCP1-201ENST00000323076 FAM135BQ49AJ0 1406 aa8.72□□□□□ -1.01
LCP1-201ENST00000323076 CCDC184Q52MB2 194 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms