RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
CD46-202ENST00000322918 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
CD46-202ENST00000322918 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
CD46-202ENST00000322918 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
CD46-202ENST00000322918 ATF3P18847 181 aa11.78□□□□□ -0.52
CD46-202ENST00000322918 DEKP35659 375 aaKnown RBP11.78□□□□□ -0.52
CD46-202ENST00000322918 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.52
CD46-202ENST00000322918 SMC4Q9NTJ3 1288 aa11.77□□□□□ -0.52
CD46-202ENST00000322918 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
CD46-202ENST00000322918 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
CD46-202ENST00000322918 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
CD46-202ENST00000322918 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
CD46-202ENST00000322918 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
CD46-202ENST00000322918 PIK3R4Q99570 1358 aa11.76□□□□□ -0.53
CD46-202ENST00000322918 TTC21AQ8NDW8 1320 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 TMEM94Q12767 1356 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 EYA1Q99502 592 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
CD46-202ENST00000322918 RLBP1P12271 317 aa11.75□□□□□ -0.53
CD46-202ENST00000322918 KRT28Q7Z3Y7 464 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 NGEFQ8N5V2 710 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
CD46-202ENST00000322918 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 OVOS2A0A0J9YW53 1432 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 OVOS2Q6IE36 1432 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 AATKQ6ZMQ8 1374 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
CD46-202ENST00000322918 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
CD46-202ENST00000322918 SSH1Q8WYL5 1049 aa11.73□□□□□ -0.53
CD46-202ENST00000322918 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
CD46-202ENST00000322918 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
CD46-202ENST00000322918 HOXC9P31274 260 aa11.73□□□□□ -0.53
CD46-202ENST00000322918 ADGRL3Q9HAR2 1447 aa11.73□□□□□ -0.53
CD46-202ENST00000322918 ADGRB2O60241 1585 aa11.73□□□□□ -0.53
CD46-202ENST00000322918 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
CD46-202ENST00000322918 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
CD46-202ENST00000322918 RGS3P49796 1198 aa11.72□□□□□ -0.53
CD46-202ENST00000322918 MTHFSDQ2M296 383 aaKnown RBP11.72□□□□□ -0.53
CD46-202ENST00000322918 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
CD46-202ENST00000322918 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
CD46-202ENST00000322918 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
CD46-202ENST00000322918 NALCNQ8IZF0 1738 aa11.71□□□□□ -0.53
CD46-202ENST00000322918 SSH2Q76I76 1423 aa11.71□□□□□ -0.53
CD46-202ENST00000322918 FLT4P35916 1363 aa11.71□□□□□ -0.53
CD46-202ENST00000322918 AKAP12Q02952 1782 aa11.71□□□□□ -0.54
CD46-202ENST00000322918 GCP02774 474 aa11.71□□□□□ -0.54
CD46-202ENST00000322918 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.54
CD46-202ENST00000322918 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
CD46-202ENST00000322918 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
CD46-202ENST00000322918 CHD2O14647 1828 aaKnown RBP11.7□□□□□ -0.54
CD46-202ENST00000322918 CHRNA2Q15822 529 aa11.7□□□□□ -0.54
CD46-202ENST00000322918 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
CD46-202ENST00000322918 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
CD46-202ENST00000322918 ZNF142P52746 1687 aaPredicted RBP11.69□□□□□ -0.54
CD46-202ENST00000322918 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
CD46-202ENST00000322918 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
CD46-202ENST00000322918 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
CD46-202ENST00000322918 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
CD46-202ENST00000322918 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
CD46-202ENST00000322918 GNAI1P63096 354 aa11.68□□□□□ -0.54
CD46-202ENST00000322918 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
CD46-202ENST00000322918 TRIM27P14373 513 aa11.67□□□□□ -0.54
CD46-202ENST00000322918 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
CD46-202ENST00000322918 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
CD46-202ENST00000322918 ZKSCAN2Q63HK3 967 aa11.67□□□□□ -0.54
CD46-202ENST00000322918 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
CD46-202ENST00000322918 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 IGHDP01880 384 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 DZIP1LQ8IYY4 767 aaKnown RBP11.66□□□□□ -0.54
CD46-202ENST00000322918 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 LMOD3Q0VAK6 560 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 NRKQ7Z2Y5 1582 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
CD46-202ENST00000322918 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 NBR1Q14596 966 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
CD46-202ENST00000322918 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
CD46-202ENST00000322918 TMEM57Q8N5G2 664 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 MSH6P52701 1360 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 VAMP4O75379 141 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 KCNH5Q8NCM2 988 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 IP6K1Q92551 441 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 ATF7IPQ6VMQ6 1270 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
CD46-202ENST00000322918 IL16Q14005 1332 aa11.63□□□□□ -0.55
CD46-202ENST00000322918 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
CD46-202ENST00000322918 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
CD46-202ENST00000322918 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms