RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RBSNQ9H1K0 784 aa22.07■■□□□ 1.12
PRKCB-202ENST00000321728 FAM13BQ9NYF5 915 aa22.07■■□□□ 1.12
PRKCB-202ENST00000321728 LMBRD1Q9NUN5 540 aa22.07■■□□□ 1.12
PRKCB-202ENST00000321728 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
PRKCB-202ENST00000321728 ELL2O00472 640 aaPredicted RBP22.06■■□□□ 1.12
PRKCB-202ENST00000321728 HS1BP3Q53T59 392 aa22.06■■□□□ 1.12
PRKCB-202ENST00000321728 GSPT1P15170 499 aaKnown RBP22.05■■□□□ 1.12
PRKCB-202ENST00000321728 PKP1Q13835 747 aa22.05■■□□□ 1.12
PRKCB-202ENST00000321728 ZNF428Q96B54 188 aa22.05■■□□□ 1.12
PRKCB-202ENST00000321728 TERF1P54274 439 aa22.05■■□□□ 1.12
PRKCB-202ENST00000321728 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
PRKCB-202ENST00000321728 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
PRKCB-202ENST00000321728 PPLO60437 1756 aa22.05■■□□□ 1.12
PRKCB-202ENST00000321728 PRIM1P49642 420 aaKnown RBP22.04■■□□□ 1.12
PRKCB-202ENST00000321728 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
PRKCB-202ENST00000321728 FYB1O15117 783 aa22.04■■□□□ 1.12
PRKCB-202ENST00000321728 PRPF40AO75400 957 aaKnown RBP22.04■■□□□ 1.12
PRKCB-202ENST00000321728 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
PRKCB-202ENST00000321728 VAMP4O75379 141 aa22.03■■□□□ 1.12
PRKCB-202ENST00000321728 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
PRKCB-202ENST00000321728 ARHGAP45Q92619 1136 aa22.03■■□□□ 1.12
PRKCB-202ENST00000321728 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
PRKCB-202ENST00000321728 TSPYL6Q8N831 410 aa22.02■■□□□ 1.12
PRKCB-202ENST00000321728 RBM27Q9P2N5 1060 aaKnown RBP22.02■■□□□ 1.12
PRKCB-202ENST00000321728 GLI2P10070 1586 aa22.02■■□□□ 1.12
PRKCB-202ENST00000321728 PLEKHM2Q8IWE5 1019 aa22.02■■□□□ 1.11
PRKCB-202ENST00000321728 RPGRIP1LQ68CZ1 1315 aa22.02■■□□□ 1.11
PRKCB-202ENST00000321728 CYP2E1P05181 493 aaPredicted RBP22.01■■□□□ 1.11
PRKCB-202ENST00000321728 ZNF500O60304 480 aaPredicted RBP22.01■■□□□ 1.11
PRKCB-202ENST00000321728 FCHSD2O94868 740 aa22.01■■□□□ 1.11
PRKCB-202ENST00000321728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
PRKCB-202ENST00000321728 PDLIM2Q96JY6 352 aa22.01■■□□□ 1.11
PRKCB-202ENST00000321728 TERF2IPQ9NYB0 399 aa22■■□□□ 1.11
PRKCB-202ENST00000321728 ARHGAP31Q2M1Z3 1444 aa22■■□□□ 1.11
PRKCB-202ENST00000321728 USP26Q9BXU7 913 aa22■■□□□ 1.11
PRKCB-202ENST00000321728 EIF2AK3Q9NZJ5 1116 aaKnown RBP22■■□□□ 1.11
PRKCB-202ENST00000321728 UQCRHLA0A096LP55 91 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 UQCRHP07919 91 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 IDI1Q13907 227 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 ZGPATQ8N5A5 531 aaKnown RBP21.99■■□□□ 1.11
PRKCB-202ENST00000321728 GPT2Q8TD30 523 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 PRAM1Q96QH2 718 aa21.99■■□□□ 1.11
PRKCB-202ENST00000321728 CWC22Q9HCG8 908 aaKnown RBP21.99■■□□□ 1.11
PRKCB-202ENST00000321728 PIK3R4Q99570 1358 aa21.98■■□□□ 1.11
PRKCB-202ENST00000321728 PTCH1Q13635 1447 aa21.98■■□□□ 1.11
PRKCB-202ENST00000321728 TTC22Q5TAA0 569 aa21.98■■□□□ 1.11
PRKCB-202ENST00000321728 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 ABCC4O15439 1325 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 ST18O60284 1047 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 INTS3Q68E01 1043 aaKnown RBP21.97■■□□□ 1.11
PRKCB-202ENST00000321728 C16orf71Q8IYS4 520 aaPredicted RBP21.97■■□□□ 1.11
PRKCB-202ENST00000321728 MAP7D2Q96T17 732 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
PRKCB-202ENST00000321728 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
PRKCB-202ENST00000321728 ZKSCAN5Q9Y2L8 839 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 CAMSAP1Q5T5Y3 1602 aa21.97■■□□□ 1.11
PRKCB-202ENST00000321728 HMOX1P09601 288 aa21.96■■□□□ 1.11
PRKCB-202ENST00000321728 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
PRKCB-202ENST00000321728 SYCE3A1L190 88 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 NPM1P06748 294 aaKnown RBP eCLIP21.95■■□□□ 1.1
PRKCB-202ENST00000321728 CHAMP1Q96JM3 812 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 PHACTR3Q96KR7 559 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 SIGLEC1Q9BZZ2 1709 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
PRKCB-202ENST00000321728 GNAI1P63096 354 aa21.94■■□□□ 1.1
PRKCB-202ENST00000321728 CSPP1Q1MSJ5 1256 aa21.94■■□□□ 1.1
PRKCB-202ENST00000321728 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
PRKCB-202ENST00000321728 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
PRKCB-202ENST00000321728 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
PRKCB-202ENST00000321728 CASC1Q6TDU7 716 aa21.94■■□□□ 1.1
PRKCB-202ENST00000321728 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
PRKCB-202ENST00000321728 ARID3AQ99856 593 aa21.94■■□□□ 1.1
PRKCB-202ENST00000321728 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 LRSAM1Q6UWE0 723 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 TMEM63CQ9P1W3 806 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 API5Q9BZZ5 524 aaKnown RBP21.93■■□□□ 1.1
PRKCB-202ENST00000321728 MBIPQ9NS73 344 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 ZDHHC9Q9Y397 364 aa21.93■■□□□ 1.1
PRKCB-202ENST00000321728 ABCC3O15438 1527 aa21.92■■□□□ 1.1
PRKCB-202ENST00000321728 APBB1O00213 710 aa21.92■■□□□ 1.1
PRKCB-202ENST00000321728 OTUD7AQ8TE49 926 aaPredicted RBP21.92■■□□□ 1.1
PRKCB-202ENST00000321728 CABP1Q9NZU7 370 aa21.92■■□□□ 1.1
PRKCB-202ENST00000321728 CCDC39Q9UFE4 941 aa21.92■■□□□ 1.1
PRKCB-202ENST00000321728 HDGFL2Q7Z4V5 671 aaPredicted RBP21.92■■□□□ 1.1
PRKCB-202ENST00000321728 RNF214Q8ND24 703 aa21.92■■□□□ 1.1
PRKCB-202ENST00000321728 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
PRKCB-202ENST00000321728 POGZQ7Z3K3 1410 aa21.91■■□□□ 1.1
PRKCB-202ENST00000321728 SDSP20132 328 aa21.91■■□□□ 1.1
PRKCB-202ENST00000321728 MCM5P33992 734 aa21.91■■□□□ 1.1
PRKCB-202ENST00000321728 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
PRKCB-202ENST00000321728 NSFL1CQ9UNZ2 370 aaKnown RBP21.9■■□□□ 1.1
PRKCB-202ENST00000321728 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
PRKCB-202ENST00000321728 FBXO31Q5XUX0 539 aaPredicted RBP21.89■■□□□ 1.1
PRKCB-202ENST00000321728 DYNC1I1O14576 645 aa21.88■■□□□ 1.09
PRKCB-202ENST00000321728 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
PRKCB-202ENST00000321728 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms