RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
ATG4C-201ENST00000317868 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
ATG4C-201ENST00000317868 DDX19BQ9UMR2 479 aa17.61■□□□□ 0.41
ATG4C-201ENST00000317868 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
ATG4C-201ENST00000317868 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
ATG4C-201ENST00000317868 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
ATG4C-201ENST00000317868 FTSJ3Q8IY81 847 aaKnown RBP17.61■□□□□ 0.41
ATG4C-201ENST00000317868 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
ATG4C-201ENST00000317868 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
ATG4C-201ENST00000317868 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
ATG4C-201ENST00000317868 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
ATG4C-201ENST00000317868 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
ATG4C-201ENST00000317868 SEC24BO95487 1268 aa17.59■□□□□ 0.41
ATG4C-201ENST00000317868 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
ATG4C-201ENST00000317868 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
ATG4C-201ENST00000317868 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
ATG4C-201ENST00000317868 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
ATG4C-201ENST00000317868 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.41
ATG4C-201ENST00000317868 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
ATG4C-201ENST00000317868 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
ATG4C-201ENST00000317868 USP6P35125 1406 aa17.57■□□□□ 0.4
ATG4C-201ENST00000317868 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
ATG4C-201ENST00000317868 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
ATG4C-201ENST00000317868 COG3Q96JB2 828 aa17.57■□□□□ 0.4
ATG4C-201ENST00000317868 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
ATG4C-201ENST00000317868 NEFMP07197 916 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
ATG4C-201ENST00000317868 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
ATG4C-201ENST00000317868 VAMP4O75379 141 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 HMOX1P09601 288 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
ATG4C-201ENST00000317868 LTKP29376 864 aa17.54■□□□□ 0.4
ATG4C-201ENST00000317868 SLC4A3P48751 1232 aa17.54■□□□□ 0.4
ATG4C-201ENST00000317868 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
ATG4C-201ENST00000317868 GNAI1P63096 354 aa17.53■□□□□ 0.4
ATG4C-201ENST00000317868 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
ATG4C-201ENST00000317868 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
ATG4C-201ENST00000317868 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
ATG4C-201ENST00000317868 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
ATG4C-201ENST00000317868 ABCC4O15439 1325 aa17.52■□□□□ 0.39
ATG4C-201ENST00000317868 RRS1Q15050 365 aaKnown RBP17.51■□□□□ 0.39
ATG4C-201ENST00000317868 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
ATG4C-201ENST00000317868 MBIPQ9NS73 344 aa17.51■□□□□ 0.39
ATG4C-201ENST00000317868 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
ATG4C-201ENST00000317868 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
ATG4C-201ENST00000317868 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
ATG4C-201ENST00000317868 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
ATG4C-201ENST00000317868 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
ATG4C-201ENST00000317868 ACEP12821 1306 aa17.5■□□□□ 0.39
ATG4C-201ENST00000317868 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
ATG4C-201ENST00000317868 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
ATG4C-201ENST00000317868 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
ATG4C-201ENST00000317868 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
ATG4C-201ENST00000317868 NUCB1Q02818 461 aa17.47■□□□□ 0.39
ATG4C-201ENST00000317868 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
ATG4C-201ENST00000317868 RGS12O14924 1447 aa17.46■□□□□ 0.39
ATG4C-201ENST00000317868 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
ATG4C-201ENST00000317868 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
ATG4C-201ENST00000317868 TTC21AQ8NDW8 1320 aa17.44■□□□□ 0.38
ATG4C-201ENST00000317868 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
ATG4C-201ENST00000317868 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
ATG4C-201ENST00000317868 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
ATG4C-201ENST00000317868 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
ATG4C-201ENST00000317868 ZNF142P52746 1687 aaPredicted RBP17.44■□□□□ 0.38
ATG4C-201ENST00000317868 FAM208AQ9UK61 1670 aaKnown RBP17.44■□□□□ 0.38
ATG4C-201ENST00000317868 KDRP35968 1356 aa17.43■□□□□ 0.38
ATG4C-201ENST00000317868 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
ATG4C-201ENST00000317868 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
ATG4C-201ENST00000317868 CRB1P82279 1406 aa17.43■□□□□ 0.38
ATG4C-201ENST00000317868 ANKARQ7Z5J8 1434 aa17.43■□□□□ 0.38
ATG4C-201ENST00000317868 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
ATG4C-201ENST00000317868 AEBP1Q8IUX7 1158 aa17.42■□□□□ 0.38
ATG4C-201ENST00000317868 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
ATG4C-201ENST00000317868 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
ATG4C-201ENST00000317868 BECN1Q14457 450 aa17.41■□□□□ 0.38
ATG4C-201ENST00000317868 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
ATG4C-201ENST00000317868 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
ATG4C-201ENST00000317868 LTN1O94822 1766 aa17.41■□□□□ 0.38
ATG4C-201ENST00000317868 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
ATG4C-201ENST00000317868 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
ATG4C-201ENST00000317868 CHL1O00533 1208 aa17.4■□□□□ 0.38
ATG4C-201ENST00000317868 CHD1LQ86WJ1 897 aa17.4■□□□□ 0.38
ATG4C-201ENST00000317868 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
ATG4C-201ENST00000317868 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
ATG4C-201ENST00000317868 SULT6B1Q6IMI4 303 aa17.39■□□□□ 0.37
ATG4C-201ENST00000317868 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
ATG4C-201ENST00000317868 TUBGCP6Q96RT7 1819 aa17.39■□□□□ 0.37
ATG4C-201ENST00000317868 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
ATG4C-201ENST00000317868 FLT4P35916 1363 aa17.38■□□□□ 0.37
ATG4C-201ENST00000317868 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
ATG4C-201ENST00000317868 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
ATG4C-201ENST00000317868 PHRF1Q9P1Y6 1649 aaKnown RBP17.38■□□□□ 0.37
ATG4C-201ENST00000317868 SLC26A8Q96RN1 970 aa17.38■□□□□ 0.37
ATG4C-201ENST00000317868 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
ATG4C-201ENST00000317868 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
ATG4C-201ENST00000317868 HSP90AB2PQ58FF8 381 aa17.37■□□□□ 0.37
ATG4C-201ENST00000317868 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
ATG4C-201ENST00000317868 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 263.4 ms