RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
PCDHB9-201ENST00000316105 SYNMO15061 1565 aa16.46■□□□□ 0.22
PCDHB9-201ENST00000316105 GNAI2P04899 355 aa16.46■□□□□ 0.22
PCDHB9-201ENST00000316105 C8orf34Q49A92 452 aa16.46■□□□□ 0.22
PCDHB9-201ENST00000316105 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.22
PCDHB9-201ENST00000316105 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.22
PCDHB9-201ENST00000316105 TET3O43151 1660 aa16.45■□□□□ 0.22
PCDHB9-201ENST00000316105 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
PCDHB9-201ENST00000316105 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
PCDHB9-201ENST00000316105 NEXNQ0ZGT2 675 aa16.45■□□□□ 0.22
PCDHB9-201ENST00000316105 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
PCDHB9-201ENST00000316105 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
PCDHB9-201ENST00000316105 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
PCDHB9-201ENST00000316105 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
PCDHB9-201ENST00000316105 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 PHACTR3Q96KR7 559 aa16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 KIF1BO60333 1816 aa16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
PCDHB9-201ENST00000316105 ATF3P18847 181 aa16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 ARAP3Q8WWN8 1544 aa16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
PCDHB9-201ENST00000316105 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
PCDHB9-201ENST00000316105 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
PCDHB9-201ENST00000316105 ZMYM3Q14202 1370 aa16.41■□□□□ 0.22
PCDHB9-201ENST00000316105 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
PCDHB9-201ENST00000316105 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
PCDHB9-201ENST00000316105 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
PCDHB9-201ENST00000316105 DNTTIP2Q5QJE6 756 aaKnown RBP16.39■□□□□ 0.22
PCDHB9-201ENST00000316105 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.22
PCDHB9-201ENST00000316105 ZFYVE9O95405 1425 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 F6X3S4 739 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 HDAC1Q13547 482 aaPredicted RBP16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 ZRSR1Q15695 479 aaKnown RBP16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
PCDHB9-201ENST00000316105 MSNP26038 577 aaKnown RBP16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
PCDHB9-201ENST00000316105 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 RABEP1Q15276 862 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 SRCIN1Q9C0H9 1055 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
PCDHB9-201ENST00000316105 TRAK2O60296 914 aa16.36■□□□□ 0.21
PCDHB9-201ENST00000316105 NUCB2P80303 420 aa16.36■□□□□ 0.21
PCDHB9-201ENST00000316105 E9PCH4 1651 aa16.36■□□□□ 0.21
PCDHB9-201ENST00000316105 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
PCDHB9-201ENST00000316105 VAMP4O75379 141 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 MADDQ8WXG6 1647 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 NEK4P51957 841 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 MRPL50Q8N5N7 158 aaKnown RBP16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
PCDHB9-201ENST00000316105 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 CLASRPQ8N2M8 674 aaKnown RBP16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 HSP90B1P14625 803 aaKnown RBP16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 MCTP1Q6DN14 999 aa16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 ERC2O15083 957 aa16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 EVA1CP58658 441 aa16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
PCDHB9-201ENST00000316105 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.21
PCDHB9-201ENST00000316105 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 SEC24BO95487 1268 aa16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 NUCB1Q02818 461 aa16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 FOXO3O43524 673 aa16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.2
PCDHB9-201ENST00000316105 ABCC3O15438 1527 aa16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
PCDHB9-201ENST00000316105 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms