RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
TARDBP-202ENST00000315091 IL16Q14005 1332 aa16.4■□□□□ 0.22
TARDBP-202ENST00000315091 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
TARDBP-202ENST00000315091 STRCQ7RTU9 1775 aa16.39■□□□□ 0.21
TARDBP-202ENST00000315091 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
TARDBP-202ENST00000315091 FOXO3O43524 673 aa16.38■□□□□ 0.21
TARDBP-202ENST00000315091 NEFMP07197 916 aa16.38■□□□□ 0.21
TARDBP-202ENST00000315091 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
TARDBP-202ENST00000315091 RGPD1P0DJD0 1748 aa16.38■□□□□ 0.21
TARDBP-202ENST00000315091 MST1RQ04912 1400 aa16.38■□□□□ 0.21
TARDBP-202ENST00000315091 AMPHP49418 695 aa16.37■□□□□ 0.21
TARDBP-202ENST00000315091 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
TARDBP-202ENST00000315091 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
TARDBP-202ENST00000315091 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
TARDBP-202ENST00000315091 BCAR3O75815 825 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 ATF3P18847 181 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 HOXC9P31274 260 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 NFAT5O94916 1531 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 KIF1AQ12756 1690 aa16.35■□□□□ 0.21
TARDBP-202ENST00000315091 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-202ENST00000315091 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.21
TARDBP-202ENST00000315091 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.21
TARDBP-202ENST00000315091 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.21
TARDBP-202ENST00000315091 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 KDRP35968 1356 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 IGSF1Q8N6C5 1336 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
TARDBP-202ENST00000315091 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 CADPS2Q86UW7 1296 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
TARDBP-202ENST00000315091 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
TARDBP-202ENST00000315091 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
TARDBP-202ENST00000315091 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
TARDBP-202ENST00000315091 EYA1Q99502 592 aa16.32■□□□□ 0.2
TARDBP-202ENST00000315091 SLIT3O75094 1523 aa16.31■□□□□ 0.2
TARDBP-202ENST00000315091 MSH6P52701 1360 aa16.31■□□□□ 0.2
TARDBP-202ENST00000315091 USP19O94966 1318 aa16.3■□□□□ 0.2
TARDBP-202ENST00000315091 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
TARDBP-202ENST00000315091 IP6K1Q92551 441 aa16.3■□□□□ 0.2
TARDBP-202ENST00000315091 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
TARDBP-202ENST00000315091 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-202ENST00000315091 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
TARDBP-202ENST00000315091 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
TARDBP-202ENST00000315091 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
TARDBP-202ENST00000315091 GCP02774 474 aa16.29■□□□□ 0.2
TARDBP-202ENST00000315091 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
TARDBP-202ENST00000315091 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
TARDBP-202ENST00000315091 FAM83GA6ND36 823 aa16.27■□□□□ 0.2
TARDBP-202ENST00000315091 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
TARDBP-202ENST00000315091 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
TARDBP-202ENST00000315091 PDE3AQ14432 1141 aa16.26■□□□□ 0.19
TARDBP-202ENST00000315091 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
TARDBP-202ENST00000315091 LTN1O94822 1766 aa16.26■□□□□ 0.19
TARDBP-202ENST00000315091 DDX17Q92841 729 aaKnown RBP16.26■□□□□ 0.19
TARDBP-202ENST00000315091 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
TARDBP-202ENST00000315091 GNAI1P63096 354 aa16.25■□□□□ 0.19
TARDBP-202ENST00000315091 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
TARDBP-202ENST00000315091 NPHP3Q7Z494 1330 aa16.25■□□□□ 0.19
TARDBP-202ENST00000315091 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
TARDBP-202ENST00000315091 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
TARDBP-202ENST00000315091 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
TARDBP-202ENST00000315091 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
TARDBP-202ENST00000315091 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
TARDBP-202ENST00000315091 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-202ENST00000315091 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
TARDBP-202ENST00000315091 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
TARDBP-202ENST00000315091 PXDNQ92626 1479 aa16.23■□□□□ 0.19
TARDBP-202ENST00000315091 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
TARDBP-202ENST00000315091 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
TARDBP-202ENST00000315091 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
TARDBP-202ENST00000315091 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
TARDBP-202ENST00000315091 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
TARDBP-202ENST00000315091 MCM10Q7L590 875 aa16.21■□□□□ 0.19
TARDBP-202ENST00000315091 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
TARDBP-202ENST00000315091 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
TARDBP-202ENST00000315091 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
TARDBP-202ENST00000315091 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
TARDBP-202ENST00000315091 PANK1Q8TE04 598 aa16.2■□□□□ 0.18
TARDBP-202ENST00000315091 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
TARDBP-202ENST00000315091 CRB1P82279 1406 aa16.2■□□□□ 0.18
TARDBP-202ENST00000315091 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 CHL1O00533 1208 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 VAMP4O75379 141 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 RLBP1P12271 317 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 USHBP1Q8N6Y0 703 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
TARDBP-202ENST00000315091 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
TARDBP-202ENST00000315091 ZBTB7CA1YPR0 619 aa16.18■□□□□ 0.18
TARDBP-202ENST00000315091 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
TARDBP-202ENST00000315091 AXIN2Q9Y2T1 843 aa16.18■□□□□ 0.18
TARDBP-202ENST00000315091 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
TARDBP-202ENST00000315091 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-202ENST00000315091 ZKSCAN2Q63HK3 967 aa16.17■□□□□ 0.18
TARDBP-202ENST00000315091 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms