RNA–Protein interactions for RNA: ENST00000314636.2

DHFR2-201, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-201ENST00000314636 LMOD3Q0VAK6 560 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 TBC1D9Q6ZT07 1266 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 PRAM1Q96QH2 718 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 CLEC17AQ6ZS10 378 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 KIF2CQ99661 725 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 FAM135BQ49AJ0 1406 aa10.43□□□□□ -0.74
DHFR2-201ENST00000314636 KIF24Q5T7B8 1368 aa10.42□□□□□ -0.74
DHFR2-201ENST00000314636 CDK19Q9BWU1 502 aa10.42□□□□□ -0.74
DHFR2-201ENST00000314636 PTPRMP28827 1452 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
DHFR2-201ENST00000314636 RABEP1Q15276 862 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 YTHDC2Q9H6S0 1430 aaKnown RBP10.41□□□□□ -0.74
DHFR2-201ENST00000314636 ABCC4O15439 1325 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 CCDC173Q0VFZ6 552 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 NUCB2P80303 420 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
DHFR2-201ENST00000314636 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
DHFR2-201ENST00000314636 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
DHFR2-201ENST00000314636 KLHL40Q2TBA0 621 aa10.4□□□□□ -0.74
DHFR2-201ENST00000314636 POLKQ9UBT6 870 aa10.4□□□□□ -0.74
DHFR2-201ENST00000314636 LRRC7Q96NW7 1537 aa10.4□□□□□ -0.75
DHFR2-201ENST00000314636 ZNF853P0CG23 659 aa10.39□□□□□ -0.75
DHFR2-201ENST00000314636 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-201ENST00000314636 CASC1Q6TDU7 716 aa10.39□□□□□ -0.75
DHFR2-201ENST00000314636 RRP9O43818 475 aaKnown RBP10.39□□□□□ -0.75
DHFR2-201ENST00000314636 DDX49Q9Y6V7 483 aaKnown RBP10.39□□□□□ -0.75
DHFR2-201ENST00000314636 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
DHFR2-201ENST00000314636 GAS2L3Q86XJ1 694 aa10.39□□□□□ -0.75
DHFR2-201ENST00000314636 C1orf115Q9H7X2 142 aa10.39□□□□□ -0.75
DHFR2-201ENST00000314636 CWC22Q9HCG8 908 aaKnown RBP10.39□□□□□ -0.75
DHFR2-201ENST00000314636 NEO1Q92859 1461 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 INTS3Q68E01 1043 aaKnown RBP10.38□□□□□ -0.75
DHFR2-201ENST00000314636 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
DHFR2-201ENST00000314636 SSFA2P28290 1259 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 NASPP49321 788 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-201ENST00000314636 GAS2L2Q8NHY3 880 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 PPP1R9BQ96SB3 815 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 HSP90AA2PQ14568 343 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-201ENST00000314636 PHACTR3Q96KR7 559 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 ATP7BP35670 1465 aa10.38□□□□□ -0.75
DHFR2-201ENST00000314636 ARHGEF40Q8TER5 1519 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 CD2BP2O95400 341 aaKnown RBP10.37□□□□□ -0.75
DHFR2-201ENST00000314636 TPM2P07951 284 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 HMOX1P09601 288 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
DHFR2-201ENST00000314636 TSPYL6Q8N831 410 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
DHFR2-201ENST00000314636 KIF20BQ96Q89 1820 aa10.37□□□□□ -0.75
DHFR2-201ENST00000314636 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
DHFR2-201ENST00000314636 TTC22Q5TAA0 569 aa10.36□□□□□ -0.75
DHFR2-201ENST00000314636 ELL2O00472 640 aaPredicted RBP10.36□□□□□ -0.75
DHFR2-201ENST00000314636 ST18O60284 1047 aa10.36□□□□□ -0.75
DHFR2-201ENST00000314636 IL13P35225 146 aa10.36□□□□□ -0.75
DHFR2-201ENST00000314636 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
DHFR2-201ENST00000314636 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
DHFR2-201ENST00000314636 ZNF445P59923 1031 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 AATKQ6ZMQ8 1374 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 RAPGEF3O95398 923 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 ZSCAN30Q86W11 494 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 USP26Q9BXU7 913 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 GSPT1P15170 499 aaKnown RBP10.35□□□□□ -0.75
DHFR2-201ENST00000314636 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
DHFR2-201ENST00000314636 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 REC8O95072 547 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 MSNP26038 577 aaKnown RBP10.34□□□□□ -0.75
DHFR2-201ENST00000314636 HS1BP3Q53T59 392 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 CDK12Q9NYV4 1490 aaPredicted RBP10.34□□□□□ -0.75
DHFR2-201ENST00000314636 DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 EDC4Q6P2E9 1401 aaKnown RBP10.34□□□□□ -0.75
DHFR2-201ENST00000314636 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 MCTP1Q6DN14 999 aa10.34□□□□□ -0.75
DHFR2-201ENST00000314636 DLC1Q96QB1 1528 aa10.33□□□□□ -0.76
DHFR2-201ENST00000314636 CPSF1Q10570 1443 aaKnown RBP10.33□□□□□ -0.76
DHFR2-201ENST00000314636 COG3Q96JB2 828 aa10.33□□□□□ -0.76
DHFR2-201ENST00000314636 YEATS2Q9ULM3 1422 aa10.33□□□□□ -0.76
DHFR2-201ENST00000314636 SENP3Q9H4L4 574 aaPredicted RBP10.33□□□□□ -0.76
DHFR2-201ENST00000314636 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
DHFR2-201ENST00000314636 EMILIN1Q9Y6C2 1016 aa10.33□□□□□ -0.76
DHFR2-201ENST00000314636 CYP2E1P05181 493 aaPredicted RBP10.32□□□□□ -0.76
DHFR2-201ENST00000314636 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
DHFR2-201ENST00000314636 HMMRO75330 724 aa10.32□□□□□ -0.76
DHFR2-201ENST00000314636 PTPRCP08575 1304 aa10.32□□□□□ -0.76
DHFR2-201ENST00000314636 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
DHFR2-201ENST00000314636 TERF1P54274 439 aa10.31□□□□□ -0.76
DHFR2-201ENST00000314636 LMBRD1Q9NUN5 540 aa10.31□□□□□ -0.76
DHFR2-201ENST00000314636 PREX1Q8TCU6 1659 aa10.31□□□□□ -0.76
DHFR2-201ENST00000314636 FBLN1P23142 703 aa10.31□□□□□ -0.76
DHFR2-201ENST00000314636 CAVIN1Q6NZI2 390 aaKnown RBP10.31□□□□□ -0.76
DHFR2-201ENST00000314636 SDSP20132 328 aa10.3□□□□□ -0.76
DHFR2-201ENST00000314636 MCM2P49736 904 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms