RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ARHGEF28Q8N1W1 1705 aaKnown RBP23.77■■□□□ 1.4
HERPUD2-201ENST00000311350 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
HERPUD2-201ENST00000311350 GAS2L3Q86XJ1 694 aa23.74■■□□□ 1.39
HERPUD2-201ENST00000311350 MFAP1P55081 439 aaKnown RBP23.74■■□□□ 1.39
HERPUD2-201ENST00000311350 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
HERPUD2-201ENST00000311350 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
HERPUD2-201ENST00000311350 RRP7AQ9Y3A4 280 aaKnown RBP23.73■■□□□ 1.39
HERPUD2-201ENST00000311350 FAM135BQ49AJ0 1406 aa23.72■■□□□ 1.39
HERPUD2-201ENST00000311350 MVPQ14764 893 aaKnown RBP23.72■■□□□ 1.39
HERPUD2-201ENST00000311350 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
HERPUD2-201ENST00000311350 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
HERPUD2-201ENST00000311350 C19orf44Q9H6X5 657 aa23.7■■□□□ 1.38
HERPUD2-201ENST00000311350 ABCC11Q96J66 1382 aa23.7■■□□□ 1.38
HERPUD2-201ENST00000311350 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
HERPUD2-201ENST00000311350 ZNF692Q9BU19 519 aaPredicted RBP23.7■■□□□ 1.38
HERPUD2-201ENST00000311350 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
HERPUD2-201ENST00000311350 IL16Q14005 1332 aa23.69■■□□□ 1.38
HERPUD2-201ENST00000311350 TNNT2P45379 298 aaPredicted RBP23.69■■□□□ 1.38
HERPUD2-201ENST00000311350 TMEM132EQ6IEE7 984 aa23.68■■□□□ 1.38
HERPUD2-201ENST00000311350 TRIM44Q96DX7 344 aaPredicted RBP23.68■■□□□ 1.38
HERPUD2-201ENST00000311350 COL3A1P02461 1466 aaPredicted RBP23.67■■□□□ 1.38
HERPUD2-201ENST00000311350 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
HERPUD2-201ENST00000311350 SETD1AO15047 1707 aaKnown RBP23.66■■□□□ 1.38
HERPUD2-201ENST00000311350 ATF3P18847 181 aa23.66■■□□□ 1.38
HERPUD2-201ENST00000311350 DZIP1LQ8IYY4 767 aaKnown RBP23.66■■□□□ 1.38
HERPUD2-201ENST00000311350 U2AF1L5P0DN76 240 aaPredicted RBP23.65■■□□□ 1.38
HERPUD2-201ENST00000311350 U2AF1Q01081 240 aaKnown RBP eCLIP23.65■■□□□ 1.38
HERPUD2-201ENST00000311350 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
HERPUD2-201ENST00000311350 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
HERPUD2-201ENST00000311350 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.37
HERPUD2-201ENST00000311350 PLEKHF1Q96S99 279 aa23.64■■□□□ 1.37
HERPUD2-201ENST00000311350 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
HERPUD2-201ENST00000311350 PTCH1Q13635 1447 aa23.63■■□□□ 1.37
HERPUD2-201ENST00000311350 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.63■■□□□ 1.37
HERPUD2-201ENST00000311350 KIAA1211Q6ZU35 1233 aa23.62■■□□□ 1.37
HERPUD2-201ENST00000311350 DCCP43146 1447 aa23.62■■□□□ 1.37
HERPUD2-201ENST00000311350 ATAD2Q6PL18 1390 aa23.62■■□□□ 1.37
HERPUD2-201ENST00000311350 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
HERPUD2-201ENST00000311350 TNPO1Q92973 898 aaKnown RBP23.61■■□□□ 1.37
HERPUD2-201ENST00000311350 ROBO2Q9HCK4 1378 aa23.61■■□□□ 1.37
HERPUD2-201ENST00000311350 TPM2P07951 284 aa23.6■■□□□ 1.37
HERPUD2-201ENST00000311350 DDX19BQ9UMR2 479 aa23.6■■□□□ 1.37
HERPUD2-201ENST00000311350 HSCBQ8IWL3 235 aa23.6■■□□□ 1.37
HERPUD2-201ENST00000311350 A0A1W2PP64 1363 aa23.6■■□□□ 1.37
HERPUD2-201ENST00000311350 ADGRL3Q9HAR2 1447 aa23.59■■□□□ 1.37
HERPUD2-201ENST00000311350 TMPOP42166 694 aaKnown RBP23.59■■□□□ 1.37
HERPUD2-201ENST00000311350 PDCL3Q9H2J4 239 aa23.59■■□□□ 1.37
HERPUD2-201ENST00000311350 DDIT3P35638 169 aa23.58■■□□□ 1.37
HERPUD2-201ENST00000311350 RBM10P98175 930 aaKnown RBP23.57■■□□□ 1.36
HERPUD2-201ENST00000311350 TRIM35Q9UPQ4 493 aa23.56■■□□□ 1.36
HERPUD2-201ENST00000311350 CDC42BPGQ6DT37 1551 aa23.56■■□□□ 1.36
HERPUD2-201ENST00000311350 CABP2Q9NPB3 220 aa23.56■■□□□ 1.36
HERPUD2-201ENST00000311350 SMC4Q9NTJ3 1288 aa23.56■■□□□ 1.36
HERPUD2-201ENST00000311350 FOXD4L1Q9NU39 408 aa23.56■■□□□ 1.36
HERPUD2-201ENST00000311350 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
HERPUD2-201ENST00000311350 ATF7IPQ6VMQ6 1270 aa23.55■■□□□ 1.36
HERPUD2-201ENST00000311350 SMC5Q8IY18 1101 aa23.55■■□□□ 1.36
HERPUD2-201ENST00000311350 EXOSC9Q06265 439 aaKnown RBP23.54■■□□□ 1.36
HERPUD2-201ENST00000311350 ISY1Q9ULR0 285 aaKnown RBP23.54■■□□□ 1.36
HERPUD2-201ENST00000311350 TRIM27P14373 513 aa23.54■■□□□ 1.36
HERPUD2-201ENST00000311350 TERF2IPQ9NYB0 399 aa23.54■■□□□ 1.36
HERPUD2-201ENST00000311350 STK26Q9P289 416 aa23.54■■□□□ 1.36
HERPUD2-201ENST00000311350 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
HERPUD2-201ENST00000311350 MST1RQ04912 1400 aa23.53■■□□□ 1.36
HERPUD2-201ENST00000311350 MED1Q15648 1581 aaPredicted RBP23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 NALCNQ8IZF0 1738 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 CD163L1Q9NR16 1453 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 ALDH1L2Q3SY69 923 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 SSH1Q8WYL5 1049 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 ZNF428Q96B54 188 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 TECPR2O15040 1411 aa23.52■■□□□ 1.36
HERPUD2-201ENST00000311350 IPO8O15397 1037 aaKnown RBP23.51■■□□□ 1.35
HERPUD2-201ENST00000311350 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
HERPUD2-201ENST00000311350 RIPK4P57078 832 aa23.51■■□□□ 1.35
HERPUD2-201ENST00000311350 BRINP3Q76B58 766 aa23.51■■□□□ 1.35
HERPUD2-201ENST00000311350 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
HERPUD2-201ENST00000311350 PPIP5K1Q6PFW1 1433 aa23.49■■□□□ 1.35
HERPUD2-201ENST00000311350 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
HERPUD2-201ENST00000311350 FYB1O15117 783 aa23.48■■□□□ 1.35
HERPUD2-201ENST00000311350 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
HERPUD2-201ENST00000311350 U2SURPO15042 1029 aaKnown RBP23.48■■□□□ 1.35
HERPUD2-201ENST00000311350 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
HERPUD2-201ENST00000311350 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
HERPUD2-201ENST00000311350 RAB3GAP1Q15042 981 aa23.47■■□□□ 1.35
HERPUD2-201ENST00000311350 CD2BP2O95400 341 aaKnown RBP23.47■■□□□ 1.35
HERPUD2-201ENST00000311350 ITPRIPQ8IWB1 547 aa23.47■■□□□ 1.35
HERPUD2-201ENST00000311350 DIAPH1O60610 1272 aaKnown RBP23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 HSP90AB1P08238 724 aaKnown RBP23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 GGNBP2Q9H3C7 697 aa23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 PRDM4Q9UKN5 801 aa23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 NOB1Q9ULX3 412 aaKnown RBP23.46■■□□□ 1.35
HERPUD2-201ENST00000311350 NASPP49321 788 aaPredicted RBP23.45■■□□□ 1.35
HERPUD2-201ENST00000311350 ZSCAN30Q86W11 494 aa23.45■■□□□ 1.35
HERPUD2-201ENST00000311350 GBP4Q96PP9 640 aa23.45■■□□□ 1.35
HERPUD2-201ENST00000311350 AHDC1Q5TGY3 1603 aaPredicted RBP23.45■■□□□ 1.34
HERPUD2-201ENST00000311350 OFD1O75665 1012 aa23.45■■□□□ 1.34
HERPUD2-201ENST00000311350 FCHSD2O94868 740 aa23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 CCDC173Q0VFZ6 552 aa23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 PPP1R9BQ96SB3 815 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms