RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 HDAC1Q13547 482 aaPredicted RBP22.33■■□□□ 1.16
SPSB4-201ENST00000310546 FER1L4A9Z1Z3 1794 aa22.32■■□□□ 1.16
SPSB4-201ENST00000310546 NPC1L1Q9UHC9 1359 aa22.32■■□□□ 1.16
SPSB4-201ENST00000310546 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
SPSB4-201ENST00000310546 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
SPSB4-201ENST00000310546 CSPP1Q1MSJ5 1256 aa22.32■■□□□ 1.16
SPSB4-201ENST00000310546 ZNF445P59923 1031 aa22.32■■□□□ 1.16
SPSB4-201ENST00000310546 SMC4Q9NTJ3 1288 aa22.31■■□□□ 1.16
SPSB4-201ENST00000310546 CARD14Q9BXL6 1004 aa22.3■■□□□ 1.16
SPSB4-201ENST00000310546 WAPLQ7Z5K2 1190 aa22.3■■□□□ 1.16
SPSB4-201ENST00000310546 PDLIM2Q96JY6 352 aa22.3■■□□□ 1.16
SPSB4-201ENST00000310546 SASS6Q6UVJ0 657 aa22.3■■□□□ 1.16
SPSB4-201ENST00000310546 WDR63Q8IWG1 891 aa22.3■■□□□ 1.16
SPSB4-201ENST00000310546 TRIM27P14373 513 aa22.29■■□□□ 1.16
SPSB4-201ENST00000310546 ADAMTSL3P82987 1691 aa22.29■■□□□ 1.16
SPSB4-201ENST00000310546 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
SPSB4-201ENST00000310546 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
SPSB4-201ENST00000310546 CCDC94Q9BW85 323 aaPredicted RBP22.28■■□□□ 1.16
SPSB4-201ENST00000310546 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
SPSB4-201ENST00000310546 DDX19BQ9UMR2 479 aa22.28■■□□□ 1.16
SPSB4-201ENST00000310546 QRICH2Q9H0J4 1663 aa22.28■■□□□ 1.16
SPSB4-201ENST00000310546 DMTNQ08495 405 aa22.27■■□□□ 1.16
SPSB4-201ENST00000310546 TSR2Q969E8 191 aaKnown RBP22.27■■□□□ 1.16
SPSB4-201ENST00000310546 JARID2Q92833 1246 aaPredicted RBP22.27■■□□□ 1.16
SPSB4-201ENST00000310546 SBNO2Q9Y2G9 1366 aa22.27■■□□□ 1.16
SPSB4-201ENST00000310546 RBM27Q9P2N5 1060 aaKnown RBP22.27■■□□□ 1.15
SPSB4-201ENST00000310546 SRPK2P78362 688 aaKnown RBP22.26■■□□□ 1.15
SPSB4-201ENST00000310546 NUTM2FA1L443 756 aa22.26■■□□□ 1.15
SPSB4-201ENST00000310546 ZSCAN20P17040 1043 aaPredicted RBP22.26■■□□□ 1.15
SPSB4-201ENST00000310546 DNTTIP2Q5QJE6 756 aaKnown RBP22.26■■□□□ 1.15
SPSB4-201ENST00000310546 AK9Q5TCS8 1911 aa22.25■■□□□ 1.15
SPSB4-201ENST00000310546 CLEC17AQ6ZS10 378 aa22.25■■□□□ 1.15
SPSB4-201ENST00000310546 RIMS1Q86UR5 1692 aaKnown RBP22.24■■□□□ 1.15
SPSB4-201ENST00000310546 TSC1Q92574 1164 aa22.24■■□□□ 1.15
SPSB4-201ENST00000310546 NUCB1Q02818 461 aa22.24■■□□□ 1.15
SPSB4-201ENST00000310546 PRPF40AO75400 957 aaKnown RBP22.24■■□□□ 1.15
SPSB4-201ENST00000310546 LMBRD1Q9NUN5 540 aa22.24■■□□□ 1.15
SPSB4-201ENST00000310546 POLR3AO14802 1390 aaPredicted RBP22.23■■□□□ 1.15
SPSB4-201ENST00000310546 PKP1Q13835 747 aa22.23■■□□□ 1.15
SPSB4-201ENST00000310546 CHD1LQ86WJ1 897 aa22.23■■□□□ 1.15
SPSB4-201ENST00000310546 RNF214Q8ND24 703 aa22.23■■□□□ 1.15
SPSB4-201ENST00000310546 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
SPSB4-201ENST00000310546 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
SPSB4-201ENST00000310546 PTMAP06454 111 aaKnown RBP22.22■■□□□ 1.15
SPSB4-201ENST00000310546 CBX1P83916 185 aa22.22■■□□□ 1.15
SPSB4-201ENST00000310546 CCDC39Q9UFE4 941 aa22.22■■□□□ 1.15
SPSB4-201ENST00000310546 UTP14CQ5TAP6 766 aaKnown RBP22.22■■□□□ 1.15
SPSB4-201ENST00000310546 TMEM57Q8N5G2 664 aa22.22■■□□□ 1.15
SPSB4-201ENST00000310546 C3P01024 1663 aa22.22■■□□□ 1.15
SPSB4-201ENST00000310546 MCM5P33992 734 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 TBC1D9Q6ZT07 1266 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 TXNDC2Q86VQ3 553 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 BMP2KLQ5H9B9 411 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 ATF7IPQ6VMQ6 1270 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 SSH1Q8WYL5 1049 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 SLC26A8Q96RN1 970 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 ARHGEF28Q8N1W1 1705 aaKnown RBP22.21■■□□□ 1.15
SPSB4-201ENST00000310546 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
SPSB4-201ENST00000310546 SYCE3A1L190 88 aa22.2■■□□□ 1.15
SPSB4-201ENST00000310546 ANKRD45Q5TZF3 282 aa22.2■■□□□ 1.14
SPSB4-201ENST00000310546 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
SPSB4-201ENST00000310546 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
SPSB4-201ENST00000310546 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
SPSB4-201ENST00000310546 MPNDQ8N594 471 aa22.19■■□□□ 1.14
SPSB4-201ENST00000310546 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
SPSB4-201ENST00000310546 NUCB2P80303 420 aa22.18■■□□□ 1.14
SPSB4-201ENST00000310546 GPT2Q8TD30 523 aa22.18■■□□□ 1.14
SPSB4-201ENST00000310546 CHAMP1Q96JM3 812 aa22.17■■□□□ 1.14
SPSB4-201ENST00000310546 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
SPSB4-201ENST00000310546 FAM177BA6PVY3 158 aa22.16■■□□□ 1.14
SPSB4-201ENST00000310546 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
SPSB4-201ENST00000310546 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
SPSB4-201ENST00000310546 U2AF1L5P0DN76 240 aaPredicted RBP22.15■■□□□ 1.14
SPSB4-201ENST00000310546 MTHFSP49914 203 aa22.15■■□□□ 1.14
SPSB4-201ENST00000310546 U2AF1Q01081 240 aaKnown RBP eCLIP22.15■■□□□ 1.14
SPSB4-201ENST00000310546 TMEM63CQ9P1W3 806 aa22.15■■□□□ 1.14
SPSB4-201ENST00000310546 CCDC27Q2M243 656 aa22.14■■□□□ 1.14
SPSB4-201ENST00000310546 LRSAM1Q6UWE0 723 aa22.14■■□□□ 1.14
SPSB4-201ENST00000310546 MYRIPQ8NFW9 859 aa22.14■■□□□ 1.14
SPSB4-201ENST00000310546 BBXQ8WY36 941 aaPredicted RBP22.14■■□□□ 1.13
SPSB4-201ENST00000310546 FBLN1P23142 703 aa22.13■■□□□ 1.13
SPSB4-201ENST00000310546 LTKP29376 864 aa22.13■■□□□ 1.13
SPSB4-201ENST00000310546 FOXD4L5Q5VV16 416 aaPredicted RBP22.13■■□□□ 1.13
SPSB4-201ENST00000310546 FOXD4L4Q8WXT5 416 aaPredicted RBP22.13■■□□□ 1.13
SPSB4-201ENST00000310546 PPP4R3BQ5MIZ7 849 aa22.12■■□□□ 1.13
SPSB4-201ENST00000310546 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
SPSB4-201ENST00000310546 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
SPSB4-201ENST00000310546 ZNF710Q8N1W2 664 aa22.12■■□□□ 1.13
SPSB4-201ENST00000310546 NSFL1CQ9UNZ2 370 aaKnown RBP22.12■■□□□ 1.13
SPSB4-201ENST00000310546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPSB4-201ENST00000310546 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
SPSB4-201ENST00000310546 IQSEC2Q5JU85 1478 aa22.11■■□□□ 1.13
SPSB4-201ENST00000310546 NSD3Q9BZ95 1437 aa22.11■■□□□ 1.13
SPSB4-201ENST00000310546 RBM33Q96EV2 1170 aaKnown RBP22.11■■□□□ 1.13
SPSB4-201ENST00000310546 A2ML1A8K2U0 1454 aa22.11■■□□□ 1.13
SPSB4-201ENST00000310546 RIMS2Q9UQ26 1411 aa22.11■■□□□ 1.13
SPSB4-201ENST00000310546 ZGPATQ8N5A5 531 aaKnown RBP22.1■■□□□ 1.13
SPSB4-201ENST00000310546 C1orf115Q9H7X2 142 aa22.1■■□□□ 1.13
SPSB4-201ENST00000310546 PTPRMP28827 1452 aa22.1■■□□□ 1.13
SPSB4-201ENST00000310546 ZNF830Q96NB3 372 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms