RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
LCLAT1-201ENST00000309052 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
LCLAT1-201ENST00000309052 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
LCLAT1-201ENST00000309052 C8orf58Q8NAV2 365 aa10.97□□□□□ -0.65
LCLAT1-201ENST00000309052 PUS7Q96PZ0 661 aaKnown RBP10.97□□□□□ -0.65
LCLAT1-201ENST00000309052 MBIPQ9NS73 344 aa10.96□□□□□ -0.65
LCLAT1-201ENST00000309052 DZIP1LQ8IYY4 767 aaKnown RBP10.96□□□□□ -0.66
LCLAT1-201ENST00000309052 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.66
LCLAT1-201ENST00000309052 NPHP4O75161 1426 aaPredicted RBP10.96□□□□□ -0.66
LCLAT1-201ENST00000309052 PIP4K2AP48426 406 aaPredicted RBP10.96□□□□□ -0.66
LCLAT1-201ENST00000309052 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 HOXC9P31274 260 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 TOM1L2Q6ZVM7 507 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 F6X3S4 739 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 GNAI1P63096 354 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 NINLQ9Y2I6 1382 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
LCLAT1-201ENST00000309052 NSD2O96028 1365 aa10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 CPS1P31327 1500 aa10.94□□□□□ -0.66
LCLAT1-201ENST00000309052 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 RTL5Q5HYW3 569 aaPredicted RBP10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 FER1L4A9Z1Z3 1794 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 SETBP1Q9Y6X0 1596 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 STK31Q9BXU1 1019 aa10.93□□□□□ -0.66
LCLAT1-201ENST00000309052 LGR6Q9HBX8 967 aa10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 USP6P35125 1406 aa10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 TRIM27P14373 513 aa10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 CALD1Q05682 793 aaKnown RBP10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 SLAIN2Q9P270 581 aa10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
LCLAT1-201ENST00000309052 MSH6P52701 1360 aa10.91□□□□□ -0.66
LCLAT1-201ENST00000309052 ARHGEF28Q8N1W1 1705 aaKnown RBP10.91□□□□□ -0.66
LCLAT1-201ENST00000309052 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
LCLAT1-201ENST00000309052 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
LCLAT1-201ENST00000309052 NKTRP30414 1462 aaKnown RBP10.91□□□□□ -0.66
LCLAT1-201ENST00000309052 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 IGHDP01880 384 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 POLR1AO95602 1720 aaPredicted RBP10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 ANP32AP39687 249 aaKnown RBP10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 LNPKQ9C0E8 428 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 TTC21AQ8NDW8 1320 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 CD163L1Q9NR16 1453 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 FAM135BQ49AJ0 1406 aa10.9□□□□□ -0.66
LCLAT1-201ENST00000309052 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.67
LCLAT1-201ENST00000309052 ATP7BP35670 1465 aa10.9□□□□□ -0.67
LCLAT1-201ENST00000309052 C3P01024 1663 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 GNAT3A8MTJ3 354 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 ZNF521Q96K83 1311 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 GAS2L2Q8NHY3 880 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 LAMC1P11047 1609 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 KCNQ3O43525 872 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 MYL6BP14649 208 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 NBR1Q14596 966 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 FLT4P35916 1363 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
LCLAT1-201ENST00000309052 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
LCLAT1-201ENST00000309052 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
LCLAT1-201ENST00000309052 ERICH6BQ5W0A0 696 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 NPHP3Q7Z494 1330 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 JARID2Q92833 1246 aaPredicted RBP10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 G2E3Q7L622 706 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
LCLAT1-201ENST00000309052 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 CPSF1Q10570 1443 aaKnown RBP10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 VAMP4O75379 141 aa10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 IP6K1Q92551 441 aa10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 MYOM1P52179 1685 aa10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 TATP17735 454 aaPredicted RBP10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 PDE4AP27815 886 aa10.86□□□□□ -0.67
LCLAT1-201ENST00000309052 BRINP3Q76B58 766 aa10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 RWDD1Q9H446 243 aaPredicted RBP10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 UBR1Q8IWV7 1749 aa10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 UBAP1LF5GYI3 381 aa10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 MVPQ14764 893 aaKnown RBP10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
LCLAT1-201ENST00000309052 MYO3AQ8NEV4 1616 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms