RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MRPL50Q8N5N7 158 aaKnown RBP13.7□□□□□ -0.22
PTPN7-201ENST00000309017 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 VAMP4O75379 141 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-201ENST00000309017 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-201ENST00000309017 OFD1O75665 1012 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 PKP1Q13835 747 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-201ENST00000309017 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
PTPN7-201ENST00000309017 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
PTPN7-201ENST00000309017 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
PTPN7-201ENST00000309017 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
PTPN7-201ENST00000309017 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
PTPN7-201ENST00000309017 PHACTR3Q96KR7 559 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 SYCE3A1L190 88 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 ZGPATQ8N5A5 531 aaKnown RBP13.68□□□□□ -0.22
PTPN7-201ENST00000309017 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
PTPN7-201ENST00000309017 SMARCA5O60264 1052 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-201ENST00000309017 MBIPQ9NS73 344 aa13.67□□□□□ -0.22
PTPN7-201ENST00000309017 ZCCHC11Q5TAX3 1644 aaKnown RBP13.67□□□□□ -0.22
PTPN7-201ENST00000309017 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
PTPN7-201ENST00000309017 REC8O95072 547 aa13.67□□□□□ -0.22
PTPN7-201ENST00000309017 UQCRHP07919 91 aa13.67□□□□□ -0.22
PTPN7-201ENST00000309017 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
PTPN7-201ENST00000309017 PUS7Q96PZ0 661 aaKnown RBP13.67□□□□□ -0.22
PTPN7-201ENST00000309017 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
PTPN7-201ENST00000309017 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
PTPN7-201ENST00000309017 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
PTPN7-201ENST00000309017 LMBRD1Q9NUN5 540 aa13.66□□□□□ -0.22
PTPN7-201ENST00000309017 ZNF445P59923 1031 aa13.66□□□□□ -0.22
PTPN7-201ENST00000309017 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-201ENST00000309017 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
PTPN7-201ENST00000309017 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
PTPN7-201ENST00000309017 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
PTPN7-201ENST00000309017 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
PTPN7-201ENST00000309017 NEK4P51957 841 aa13.65□□□□□ -0.23
PTPN7-201ENST00000309017 MPNDQ8N594 471 aa13.65□□□□□ -0.23
PTPN7-201ENST00000309017 USP26Q9BXU7 913 aa13.65□□□□□ -0.23
PTPN7-201ENST00000309017 CHD1O14646 1710 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 IFT57Q9NWB7 429 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 NPATQ14207 1427 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 SDSP20132 328 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
PTPN7-201ENST00000309017 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 ADGRB2O60241 1585 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 SETBP1Q9Y6X0 1596 aa13.63□□□□□ -0.23
PTPN7-201ENST00000309017 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 NOL7Q9UMY1 257 aaKnown RBP13.62□□□□□ -0.23
PTPN7-201ENST00000309017 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-201ENST00000309017 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 POLKQ9UBT6 870 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 IDI1Q13907 227 aa13.62□□□□□ -0.23
PTPN7-201ENST00000309017 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 CFAP74Q9C0B2 1584 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 ERC2O15083 957 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 ZKSCAN5Q9Y2L8 839 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 ABCC4O15439 1325 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 MCCP23508 829 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 CLEC17AQ6ZS10 378 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
PTPN7-201ENST00000309017 TRIM6-TRIM34B2RNG4 842 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 MBD3O95983 291 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-201ENST00000309017 MAP7D2Q96T17 732 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 HMMRO75330 724 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 PPRC1Q5VV67 1664 aaKnown RBP13.6□□□□□ -0.23
PTPN7-201ENST00000309017 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
PTPN7-201ENST00000309017 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-201ENST00000309017 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
PTPN7-201ENST00000309017 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
PTPN7-201ENST00000309017 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
PTPN7-201ENST00000309017 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
PTPN7-201ENST00000309017 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-201ENST00000309017 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-201ENST00000309017 ANKRD44Q8N8A2 993 aa13.58□□□□□ -0.23
PTPN7-201ENST00000309017 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
PTPN7-201ENST00000309017 TSPY26PQ9H489 355 aa13.58□□□□□ -0.24
PTPN7-201ENST00000309017 GLI2P10070 1586 aa13.58□□□□□ -0.24
PTPN7-201ENST00000309017 SOX12O15370 315 aa13.58□□□□□ -0.24
PTPN7-201ENST00000309017 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms