RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
LEMD3-201ENST00000308330 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
LEMD3-201ENST00000308330 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
LEMD3-201ENST00000308330 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
LEMD3-201ENST00000308330 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
LEMD3-201ENST00000308330 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
LEMD3-201ENST00000308330 CAVIN1Q6NZI2 390 aaKnown RBP18.29■□□□□ 0.52
LEMD3-201ENST00000308330 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
LEMD3-201ENST00000308330 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
LEMD3-201ENST00000308330 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
LEMD3-201ENST00000308330 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
LEMD3-201ENST00000308330 CRBNQ96SW2 442 aa18.27■□□□□ 0.52
LEMD3-201ENST00000308330 MNAT1P51948 309 aa18.27■□□□□ 0.52
LEMD3-201ENST00000308330 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.52
LEMD3-201ENST00000308330 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.52
LEMD3-201ENST00000308330 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.51
LEMD3-201ENST00000308330 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.51
LEMD3-201ENST00000308330 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.51
LEMD3-201ENST00000308330 TTLL5Q6EMB2 1281 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
LEMD3-201ENST00000308330 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 MCTP1Q6DN14 999 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 API5Q9BZZ5 524 aaKnown RBP18.26■□□□□ 0.51
LEMD3-201ENST00000308330 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 CDR1P51861 262 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 HSPA2P54652 639 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
LEMD3-201ENST00000308330 RIC3Q7Z5B4 369 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
LEMD3-201ENST00000308330 TNRQ92752 1358 aa18.25■□□□□ 0.51
LEMD3-201ENST00000308330 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
LEMD3-201ENST00000308330 DYDC1Q8WWB3 177 aa18.24■□□□□ 0.51
LEMD3-201ENST00000308330 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
LEMD3-201ENST00000308330 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
LEMD3-201ENST00000308330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
LEMD3-201ENST00000308330 FEZ1Q99689 392 aa18.23■□□□□ 0.51
LEMD3-201ENST00000308330 PTPN23Q9H3S7 1636 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 TTC31Q49AM3 519 aaPredicted RBP18.22■□□□□ 0.51
LEMD3-201ENST00000308330 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 LIG1P18858 919 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 C10orf67Q8IYJ2 551 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 TXLNBQ8N3L3 684 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
LEMD3-201ENST00000308330 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
LEMD3-201ENST00000308330 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
LEMD3-201ENST00000308330 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 NUCB2P80303 420 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 ANKRD20A12PQ8NF67 263 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 KCNH5Q8NCM2 988 aa18.21■□□□□ 0.51
LEMD3-201ENST00000308330 MAP3K1Q13233 1512 aa18.21■□□□□ 0.5
LEMD3-201ENST00000308330 GABPB1Q06547 395 aaPredicted RBP18.21■□□□□ 0.5
LEMD3-201ENST00000308330 TMX1Q9H3N1 280 aa18.21■□□□□ 0.5
LEMD3-201ENST00000308330 CPSF2Q9P2I0 782 aaKnown RBP18.21■□□□□ 0.5
LEMD3-201ENST00000308330 OGFRQ9NZT2 677 aa18.2■□□□□ 0.5
LEMD3-201ENST00000308330 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
LEMD3-201ENST00000308330 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
LEMD3-201ENST00000308330 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
LEMD3-201ENST00000308330 CABP4P57796 275 aa18.2■□□□□ 0.5
LEMD3-201ENST00000308330 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
LEMD3-201ENST00000308330 WDR62O43379 1518 aa18.2■□□□□ 0.5
LEMD3-201ENST00000308330 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
LEMD3-201ENST00000308330 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
LEMD3-201ENST00000308330 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
LEMD3-201ENST00000308330 KIAA0754O94854 1291 aa18.19■□□□□ 0.5
LEMD3-201ENST00000308330 SETSIPP0DME0 302 aa18.19■□□□□ 0.5
LEMD3-201ENST00000308330 SKIDA1Q1XH10 827 aa18.19■□□□□ 0.5
LEMD3-201ENST00000308330 DRC1Q96MC2 740 aa18.19■□□□□ 0.5
LEMD3-201ENST00000308330 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
LEMD3-201ENST00000308330 MPNDQ8N594 471 aa18.18■□□□□ 0.5
LEMD3-201ENST00000308330 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
LEMD3-201ENST00000308330 NUP160Q12769 1436 aa18.18■□□□□ 0.5
LEMD3-201ENST00000308330 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
LEMD3-201ENST00000308330 A2MP01023 1474 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 TSPY26PQ9H489 355 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 KDM5BQ9UGL1 1544 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 RNF20Q5VTR2 975 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 RILPL2Q969X0 211 aa18.17■□□□□ 0.5
LEMD3-201ENST00000308330 A0A1B0GUL7 405 aa18.16■□□□□ 0.5
LEMD3-201ENST00000308330 FAM107BQ9H098 131 aa18.16■□□□□ 0.5
LEMD3-201ENST00000308330 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
LEMD3-201ENST00000308330 NOS1P29475 1434 aa18.16■□□□□ 0.5
LEMD3-201ENST00000308330 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
LEMD3-201ENST00000308330 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
LEMD3-201ENST00000308330 ST18O60284 1047 aa18.15■□□□□ 0.5
LEMD3-201ENST00000308330 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.56e-8■□□□□ 11.3
LEMD3-201ENST00000308330 BRD4O60885 1362 aaPredicted RBP18.15■□□□□ 0.5
LEMD3-201ENST00000308330 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
LEMD3-201ENST00000308330 NF2P35240 595 aa18.15■□□□□ 0.5
LEMD3-201ENST00000308330 NME9Q86XW9 330 aa18.15■□□□□ 0.5
LEMD3-201ENST00000308330 C22orf23Q9BZE7 217 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms