RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
RAPH1-201ENST00000308091 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
RAPH1-201ENST00000308091 ALKQ9UM73 1620 aa23.24■■□□□ 1.31
RAPH1-201ENST00000308091 NME9Q86XW9 330 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 RBM25P49756 843 aaKnown RBP23.23■■□□□ 1.31
RAPH1-201ENST00000308091 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 FOXD4L1Q9NU39 408 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 MRE11P49959 708 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
RAPH1-201ENST00000308091 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
RAPH1-201ENST00000308091 FAM83GA6ND36 823 aa23.22■■□□□ 1.31
RAPH1-201ENST00000308091 TRIM44Q96DX7 344 aaPredicted RBP23.22■■□□□ 1.31
RAPH1-201ENST00000308091 NCKAP5LQ9HCH0 1330 aa23.22■■□□□ 1.31
RAPH1-201ENST00000308091 CD2BP2O95400 341 aaKnown RBP23.21■■□□□ 1.31
RAPH1-201ENST00000308091 DCTN1Q14203 1278 aa23.2■■□□□ 1.3
RAPH1-201ENST00000308091 BMP2KLQ5H9B9 411 aa23.2■■□□□ 1.3
RAPH1-201ENST00000308091 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
RAPH1-201ENST00000308091 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
RAPH1-201ENST00000308091 KIF20BQ96Q89 1820 aa23.19■■□□□ 1.3
RAPH1-201ENST00000308091 RICTORQ6R327 1708 aa23.19■■□□□ 1.3
RAPH1-201ENST00000308091 GAS2L3Q86XJ1 694 aa23.19■■□□□ 1.3
RAPH1-201ENST00000308091 KIF2CQ99661 725 aa23.19■■□□□ 1.3
RAPH1-201ENST00000308091 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
RAPH1-201ENST00000308091 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
RAPH1-201ENST00000308091 ARID3AQ99856 593 aa23.18■■□□□ 1.3
RAPH1-201ENST00000308091 IL13P35225 146 aa23.18■■□□□ 1.3
RAPH1-201ENST00000308091 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
RAPH1-201ENST00000308091 TWISTNBQ3B726 338 aaPredicted RBP23.18■■□□□ 1.3
RAPH1-201ENST00000308091 BRPF1P55201 1214 aaPredicted RBP23.17■■□□□ 1.3
RAPH1-201ENST00000308091 DDIT3P35638 169 aa23.17■■□□□ 1.3
RAPH1-201ENST00000308091 GNAI1P63096 354 aa23.17■■□□□ 1.3
RAPH1-201ENST00000308091 RBM10P98175 930 aaKnown RBP23.16■■□□□ 1.3
RAPH1-201ENST00000308091 CDC42BPGQ6DT37 1551 aa23.16■■□□□ 1.3
RAPH1-201ENST00000308091 TNPO1Q92973 898 aaKnown RBP23.16■■□□□ 1.3
RAPH1-201ENST00000308091 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
RAPH1-201ENST00000308091 GCC1Q96CN9 775 aa23.16■■□□□ 1.3
RAPH1-201ENST00000308091 IFT57Q9NWB7 429 aa23.16■■□□□ 1.3
RAPH1-201ENST00000308091 NCOA3Q9Y6Q9 1424 aa23.15■■□□□ 1.3
RAPH1-201ENST00000308091 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
RAPH1-201ENST00000308091 SNX21Q969T3 373 aa23.15■■□□□ 1.3
RAPH1-201ENST00000308091 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
RAPH1-201ENST00000308091 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
RAPH1-201ENST00000308091 ZNF853P0CG23 659 aa23.14■■□□□ 1.29
RAPH1-201ENST00000308091 ABCC4O15439 1325 aa23.14■■□□□ 1.29
RAPH1-201ENST00000308091 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
RAPH1-201ENST00000308091 MLECQ14165 292 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 CALD1Q05682 793 aaKnown RBP23.12■■□□□ 1.29
RAPH1-201ENST00000308091 PIK3R4Q99570 1358 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 DDX11L8A8MPP1 907 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 KRT24Q2M2I5 525 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 KIAA1211Q6ZU35 1233 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
RAPH1-201ENST00000308091 ATP7BP35670 1465 aa23.1■■□□□ 1.29
RAPH1-201ENST00000308091 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
RAPH1-201ENST00000308091 WASLO00401 505 aaPredicted RBP23.09■■□□□ 1.29
RAPH1-201ENST00000308091 GSPT1P15170 499 aaKnown RBP23.09■■□□□ 1.29
RAPH1-201ENST00000308091 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
RAPH1-201ENST00000308091 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.29
RAPH1-201ENST00000308091 COG3Q96JB2 828 aa23.07■■□□□ 1.28
RAPH1-201ENST00000308091 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
RAPH1-201ENST00000308091 RAB3GAP1Q15042 981 aa23.06■■□□□ 1.28
RAPH1-201ENST00000308091 NUDT16Q96DE0 195 aaKnown RBP23.06■■□□□ 1.28
RAPH1-201ENST00000308091 EDC4Q6P2E9 1401 aaKnown RBP23.06■■□□□ 1.28
RAPH1-201ENST00000308091 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
RAPH1-201ENST00000308091 GAS2L2Q8NHY3 880 aa23.06■■□□□ 1.28
RAPH1-201ENST00000308091 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
RAPH1-201ENST00000308091 K7ELQ4 463 aaPredicted RBP23.06■■□□□ 1.28
RAPH1-201ENST00000308091 APBB1O00213 710 aa23.06■■□□□ 1.28
RAPH1-201ENST00000308091 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
RAPH1-201ENST00000308091 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
RAPH1-201ENST00000308091 OTUD7AQ8TE49 926 aaPredicted RBP23.05■■□□□ 1.28
RAPH1-201ENST00000308091 METP08581 1390 aa23.05■■□□□ 1.28
RAPH1-201ENST00000308091 PLEKHM2Q8IWE5 1019 aa23.05■■□□□ 1.28
RAPH1-201ENST00000308091 CPS1P31327 1500 aa23.04■■□□□ 1.28
RAPH1-201ENST00000308091 CDC45O75419 566 aa23.04■■□□□ 1.28
RAPH1-201ENST00000308091 CDK12Q9NYV4 1490 aaPredicted RBP23.04■■□□□ 1.28
RAPH1-201ENST00000308091 SSFA2P28290 1259 aa23.03■■□□□ 1.28
RAPH1-201ENST00000308091 GBP4Q96PP9 640 aa23.03■■□□□ 1.28
RAPH1-201ENST00000308091 LMOD3Q0VAK6 560 aa23.02■■□□□ 1.28
RAPH1-201ENST00000308091 CIZ1Q9ULV3 898 aaPredicted RBP23.02■■□□□ 1.28
RAPH1-201ENST00000308091 MCM10Q7L590 875 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 FAM13BQ9NYF5 915 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 DLG5Q8TDM6 1919 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
RAPH1-201ENST00000308091 DLC1Q96QB1 1528 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 SMARCA5O60264 1052 aaPredicted RBP23■■□□□ 1.27
RAPH1-201ENST00000308091 PDCL3Q9H2J4 239 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 SOX12O15370 315 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 DCTPP1Q9H773 170 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 CCDC61Q9Y6R9 512 aa23■■□□□ 1.27
RAPH1-201ENST00000308091 RIMBP3CA6NJZ7 1639 aa22.99■■□□□ 1.27
RAPH1-201ENST00000308091 RIMBP3BA6NNM3 1639 aa22.99■■□□□ 1.27
RAPH1-201ENST00000308091 RIMBP3Q9UFD9 1639 aa22.99■■□□□ 1.27
RAPH1-201ENST00000308091 AATKQ6ZMQ8 1374 aa22.99■■□□□ 1.27
RAPH1-201ENST00000308091 TPM2P07951 284 aa22.99■■□□□ 1.27
RAPH1-201ENST00000308091 FAM69CQ0P6D2 419 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms