RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 TTC39AQ5SRH9 613 aa23.53■■□□□ 1.36
CTNND2-201ENST00000304623 RRP9O43818 475 aaKnown RBP23.53■■□□□ 1.36
CTNND2-201ENST00000304623 SYCP1Q15431 976 aa23.53■■□□□ 1.36
CTNND2-201ENST00000304623 MTMR7Q9Y216 660 aa23.53■■□□□ 1.36
CTNND2-201ENST00000304623 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.36
CTNND2-201ENST00000304623 KIAA0754O94854 1291 aa23.52■■□□□ 1.36
CTNND2-201ENST00000304623 PKNOX2Q96KN3 472 aa23.52■■□□□ 1.36
CTNND2-201ENST00000304623 CEP57L1Q8IYX8 460 aa23.51■■□□□ 1.35
CTNND2-201ENST00000304623 CFAP45Q9UL16 551 aa23.51■■□□□ 1.35
CTNND2-201ENST00000304623 SAMD1Q6SPF0 538 aaPredicted RBP23.51■■□□□ 1.35
CTNND2-201ENST00000304623 SKIDA1Q1XH10 827 aa23.51■■□□□ 1.35
CTNND2-201ENST00000304623 KRT18P05783 430 aaKnown RBP23.5■■□□□ 1.35
CTNND2-201ENST00000304623 STK3Q13188 491 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 NUTM2GQ5VZR2 741 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 SPATA32Q96LK8 384 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 NUP62CLQ9H1M0 184 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 CCDC181Q5TID7 509 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 IKQ13123 557 aaPredicted RBP23.5■■□□□ 1.35
CTNND2-201ENST00000304623 BLOC1S2Q6QNY1 142 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 ZNF428Q96B54 188 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
CTNND2-201ENST00000304623 ATF3P18847 181 aa23.49■■□□□ 1.35
CTNND2-201ENST00000304623 NACAP1Q9BZK3 213 aa23.49■■□□□ 1.35
CTNND2-201ENST00000304623 GPRASP1Q5JY77 1395 aa23.48■■□□□ 1.35
CTNND2-201ENST00000304623 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
CTNND2-201ENST00000304623 DEF6Q9H4E7 631 aa23.48■■□□□ 1.35
CTNND2-201ENST00000304623 PDRG1Q9NUG6 133 aa23.48■■□□□ 1.35
CTNND2-201ENST00000304623 GNL3LQ9NVN8 582 aaKnown RBP23.47■■□□□ 1.35
CTNND2-201ENST00000304623 ZSCAN30Q86W11 494 aa23.47■■□□□ 1.35
CTNND2-201ENST00000304623 NBPF1Q3BBV0 1214 aa23.47■■□□□ 1.35
CTNND2-201ENST00000304623 CDKL5O76039 1030 aa23.47■■□□□ 1.35
CTNND2-201ENST00000304623 IQCEQ6IPM2 695 aa23.47■■□□□ 1.35
CTNND2-201ENST00000304623 GOLGA6L7A0A1B0GV03 622 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 PDCL2Q8N4E4 241 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 KIAA1107Q9UPP5 1409 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 KRT32Q14532 448 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 RPAP2Q8IXW5 612 aaPredicted RBP23.46■■□□□ 1.35
CTNND2-201ENST00000304623 ABTB2Q8N961 1025 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 NOL7Q9UMY1 257 aaKnown RBP23.46■■□□□ 1.35
CTNND2-201ENST00000304623 CNNM1Q9NRU3 951 aa23.46■■□□□ 1.35
CTNND2-201ENST00000304623 SMTNL1A8MU46 457 aa23.45■■□□□ 1.34
CTNND2-201ENST00000304623 ZSCAN25Q6NSZ9 544 aa23.45■■□□□ 1.34
CTNND2-201ENST00000304623 CCDC69A6NI79 296 aa23.45■■□□□ 1.34
CTNND2-201ENST00000304623 ZRSR2Q15696 482 aaKnown RBP23.45■■□□□ 1.34
CTNND2-201ENST00000304623 MPNDQ8N594 471 aa23.45■■□□□ 1.34
CTNND2-201ENST00000304623 UPF3BQ9BZI7 483 aaKnown RBP23.44■■□□□ 1.34
CTNND2-201ENST00000304623 SULT6B1Q6IMI4 303 aa23.44■■□□□ 1.34
CTNND2-201ENST00000304623 SLC12A5Q9H2X9 1139 aa23.43■■□□□ 1.34
CTNND2-201ENST00000304623 NBPF8Q3BBV2 869 aa23.43■■□□□ 1.34
CTNND2-201ENST00000304623 ZNF692Q9BU19 519 aaPredicted RBP23.43■■□□□ 1.34
CTNND2-201ENST00000304623 JAKMIP1Q96N16 626 aaKnown RBP23.43■■□□□ 1.34
CTNND2-201ENST00000304623 CTNNA3Q9UI47 895 aa23.43■■□□□ 1.34
CTNND2-201ENST00000304623 KIF2AO00139 706 aaPredicted RBP23.42■■□□□ 1.34
CTNND2-201ENST00000304623 NEFHP12036 1026 aa23.42■■□□□ 1.34
CTNND2-201ENST00000304623 USP8P40818 1118 aa23.42■■□□□ 1.34
CTNND2-201ENST00000304623 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
CTNND2-201ENST00000304623 MAP3K11Q16584 847 aa23.41■■□□□ 1.34
CTNND2-201ENST00000304623 ERBINQ96RT1 1412 aa23.41■■□□□ 1.34
CTNND2-201ENST00000304623 FAM177A1Q8N128 213 aaPredicted RBP23.41■■□□□ 1.34
CTNND2-201ENST00000304623 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
CTNND2-201ENST00000304623 FILIP1Q7Z7B0 1213 aa23.4■■□□□ 1.34
CTNND2-201ENST00000304623 AACSQ86V21 672 aa23.4■■□□□ 1.34
CTNND2-201ENST00000304623 PRDM2Q13029 1718 aa23.4■■□□□ 1.34
CTNND2-201ENST00000304623 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.34
CTNND2-201ENST00000304623 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.34
CTNND2-201ENST00000304623 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
CTNND2-201ENST00000304623 TANGO6Q9C0B7 1094 aa23.39■■□□□ 1.33
CTNND2-201ENST00000304623 SIL1Q9H173 461 aa23.39■■□□□ 1.33
CTNND2-201ENST00000304623 SLFN5Q08AF3 891 aa23.39■■□□□ 1.33
CTNND2-201ENST00000304623 UBXN4Q92575 508 aa23.39■■□□□ 1.33
CTNND2-201ENST00000304623 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
CTNND2-201ENST00000304623 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
CTNND2-201ENST00000304623 HSP90AB3PQ58FF7 597 aa23.38■■□□□ 1.33
CTNND2-201ENST00000304623 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
CTNND2-201ENST00000304623 SEPT7Q16181 437 aaKnown RBP23.38■■□□□ 1.33
CTNND2-201ENST00000304623 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
CTNND2-201ENST00000304623 PDCL3Q9H2J4 239 aa23.37■■□□□ 1.33
CTNND2-201ENST00000304623 TAF3Q5VWG9 929 aa23.37■■□□□ 1.33
CTNND2-201ENST00000304623 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
CTNND2-201ENST00000304623 WASF1Q92558 559 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 SYCE3A1L190 88 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 CWC27Q6UX04 472 aaKnown RBP23.36■■□□□ 1.33
CTNND2-201ENST00000304623 GBP3Q9H0R5 595 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 FCHSD2O94868 740 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 FAM177BA6PVY3 158 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 CDK19Q9BWU1 502 aa23.36■■□□□ 1.33
CTNND2-201ENST00000304623 EPB41L2O43491 1005 aaKnown RBP23.35■■□□□ 1.33
CTNND2-201ENST00000304623 TMEM132AQ24JP5 1023 aa23.35■■□□□ 1.33
CTNND2-201ENST00000304623 CFTRP13569 1480 aa23.35■■□□□ 1.33
CTNND2-201ENST00000304623 NUP133Q8WUM0 1156 aa23.35■■□□□ 1.33
CTNND2-201ENST00000304623 RBM42Q9BTD8 480 aaKnown RBP23.35■■□□□ 1.33
CTNND2-201ENST00000304623 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
CTNND2-201ENST00000304623 BMP2KQ9NSY1 1161 aaPredicted RBP23.34■■□□□ 1.33
CTNND2-201ENST00000304623 PLCD4Q9BRC7 762 aa23.34■■□□□ 1.33
CTNND2-201ENST00000304623 CABP1Q9NZU7 370 aa23.34■■□□□ 1.33
CTNND2-201ENST00000304623 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
CTNND2-201ENST00000304623 ARHGAP29Q52LW3 1261 aa23.34■■□□□ 1.33
CTNND2-201ENST00000304623 CCDC102AQ96A19 550 aa23.34■■□□□ 1.33
CTNND2-201ENST00000304623 WWC2Q6AWC2 1192 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms