RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
LDB2-201ENST00000304523 ABCC4O15439 1325 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
LDB2-201ENST00000304523 TERF1P54274 439 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 PTPRMP28827 1452 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 YEATS2Q9ULM3 1422 aa11.72□□□□□ -0.53
LDB2-201ENST00000304523 OFD1O75665 1012 aa11.71□□□□□ -0.53
LDB2-201ENST00000304523 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
LDB2-201ENST00000304523 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
LDB2-201ENST00000304523 ZMYND15Q9H091 742 aa11.71□□□□□ -0.53
LDB2-201ENST00000304523 MLH3Q9UHC1 1453 aa11.71□□□□□ -0.53
LDB2-201ENST00000304523 CYP2E1P05181 493 aaPredicted RBP11.71□□□□□ -0.53
LDB2-201ENST00000304523 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
LDB2-201ENST00000304523 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
LDB2-201ENST00000304523 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.54
LDB2-201ENST00000304523 VAMP4O75379 141 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 RABEP1Q15276 862 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 ANP32BQ92688 251 aaKnown RBP11.7□□□□□ -0.54
LDB2-201ENST00000304523 PDCL3Q9H2J4 239 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 TERF2IPQ9NYB0 399 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
LDB2-201ENST00000304523 NUCB2P80303 420 aa11.69□□□□□ -0.54
LDB2-201ENST00000304523 GSPT1P15170 499 aaKnown RBP11.69□□□□□ -0.54
LDB2-201ENST00000304523 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
LDB2-201ENST00000304523 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
LDB2-201ENST00000304523 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
LDB2-201ENST00000304523 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
LDB2-201ENST00000304523 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
LDB2-201ENST00000304523 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
LDB2-201ENST00000304523 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
LDB2-201ENST00000304523 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
LDB2-201ENST00000304523 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
LDB2-201ENST00000304523 ZNF853P0CG23 659 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 PLEKHM2Q8IWE5 1019 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
LDB2-201ENST00000304523 MSNP26038 577 aaKnown RBP11.67□□□□□ -0.54
LDB2-201ENST00000304523 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
LDB2-201ENST00000304523 NFE2L2Q16236 605 aa11.66□□□□□ -0.54
LDB2-201ENST00000304523 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
LDB2-201ENST00000304523 GNAI1P63096 354 aa11.66□□□□□ -0.54
LDB2-201ENST00000304523 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
LDB2-201ENST00000304523 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
LDB2-201ENST00000304523 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
LDB2-201ENST00000304523 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
LDB2-201ENST00000304523 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
LDB2-201ENST00000304523 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.54
LDB2-201ENST00000304523 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
LDB2-201ENST00000304523 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
LDB2-201ENST00000304523 GGT6Q6P531 493 aa11.65□□□□□ -0.54
LDB2-201ENST00000304523 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
LDB2-201ENST00000304523 API5Q9BZZ5 524 aaKnown RBP11.65□□□□□ -0.54
LDB2-201ENST00000304523 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
LDB2-201ENST00000304523 CAVIN1Q6NZI2 390 aaKnown RBP11.64□□□□□ -0.55
LDB2-201ENST00000304523 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
LDB2-201ENST00000304523 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
LDB2-201ENST00000304523 PHACTR3Q96KR7 559 aa11.64□□□□□ -0.55
LDB2-201ENST00000304523 RBSNQ9H1K0 784 aa11.64□□□□□ -0.55
LDB2-201ENST00000304523 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
LDB2-201ENST00000304523 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
LDB2-201ENST00000304523 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
LDB2-201ENST00000304523 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
LDB2-201ENST00000304523 TMEM131LA2VDJ0 1609 aa11.63□□□□□ -0.55
LDB2-201ENST00000304523 PKP1Q13835 747 aa11.63□□□□□ -0.55
LDB2-201ENST00000304523 POLKQ9UBT6 870 aa11.63□□□□□ -0.55
LDB2-201ENST00000304523 ATP7BP35670 1465 aa11.63□□□□□ -0.55
LDB2-201ENST00000304523 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
LDB2-201ENST00000304523 CDK12Q9NYV4 1490 aaPredicted RBP11.62□□□□□ -0.55
LDB2-201ENST00000304523 MCM5P33992 734 aa11.62□□□□□ -0.55
LDB2-201ENST00000304523 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
LDB2-201ENST00000304523 GPT2Q8TD30 523 aa11.62□□□□□ -0.55
LDB2-201ENST00000304523 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
LDB2-201ENST00000304523 MINK1Q8N4C8 1332 aaPredicted RBP11.62□□□□□ -0.55
LDB2-201ENST00000304523 ST18O60284 1047 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 PRAM1Q96QH2 718 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 MAP7D2Q96T17 732 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 STK26Q9P289 416 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 ZDHHC9Q9Y397 364 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 ZKSCAN5Q9Y2L8 839 aa11.61□□□□□ -0.55
LDB2-201ENST00000304523 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
LDB2-201ENST00000304523 IDI1Q13907 227 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 ANKRD44Q8N8A2 993 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 RGS12O14924 1447 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 RIMS2Q9UQ26 1411 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
LDB2-201ENST00000304523 PRPF40AO75400 957 aaKnown RBP11.59□□□□□ -0.55
LDB2-201ENST00000304523 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
LDB2-201ENST00000304523 IL13P35225 146 aa11.59□□□□□ -0.55
LDB2-201ENST00000304523 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
LDB2-201ENST00000304523 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms