RNA–Protein interactions for RNA: ENST00000302909.3

KCNK3-201, Transcript of potassium two pore domain channel subfamily K member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK3, Length 6,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK3-201ENST00000302909 TTC12Q9H892 705 aaPredicted RBP20.28■□□□□ 0.84
KCNK3-201ENST00000302909 GNAI1P63096 354 aa20.28■□□□□ 0.84
KCNK3-201ENST00000302909 TRDNQ13061 729 aa20.28■□□□□ 0.84
KCNK3-201ENST00000302909 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
KCNK3-201ENST00000302909 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
KCNK3-201ENST00000302909 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.84
KCNK3-201ENST00000302909 CT47A1Q5JQC4 288 aaPredicted RBP20.27■□□□□ 0.84
KCNK3-201ENST00000302909 ENOX2Q16206 610 aaKnown RBP20.27■□□□□ 0.84
KCNK3-201ENST00000302909 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
KCNK3-201ENST00000302909 SURF6O75683 361 aaKnown RBP20.27■□□□□ 0.83
KCNK3-201ENST00000302909 C8orf34Q49A92 452 aa20.27■□□□□ 0.83
KCNK3-201ENST00000302909 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
KCNK3-201ENST00000302909 RSPH14Q9UHP6 348 aa20.26■□□□□ 0.83
KCNK3-201ENST00000302909 MCM5P33992 734 aa20.26■□□□□ 0.83
KCNK3-201ENST00000302909 TMEM57Q8N5G2 664 aa20.26■□□□□ 0.83
KCNK3-201ENST00000302909 SAFBQ15424 915 aaKnown RBP eCLIP20.26■□□□□ 0.83
KCNK3-201ENST00000302909 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
KCNK3-201ENST00000302909 COG3Q96JB2 828 aa20.26■□□□□ 0.83
KCNK3-201ENST00000302909 RAD21O60216 631 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 SLFN5Q08AF3 891 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 DNAAF4Q8WXU2 420 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 TBC1D32Q96NH3 1257 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
KCNK3-201ENST00000302909 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
KCNK3-201ENST00000302909 HCLS1P14317 486 aaPredicted RBP20.25■□□□□ 0.83
KCNK3-201ENST00000302909 WASHC4Q2M389 1173 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
KCNK3-201ENST00000302909 CEP57L1Q8IYX8 460 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 EPS15P42566 896 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 LRSAM1Q6UWE0 723 aa20.25■□□□□ 0.83
KCNK3-201ENST00000302909 PDCP20941 246 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 U2AF2P26368 475 aaKnown RBP eCLIP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 DDX11Q96FC9 970 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 LIG1P18858 919 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 CRACR2AQ9BSW2 395 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 EVC2Q86UK5 1308 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 BMS1Q14692 1282 aaKnown RBP20.24■□□□□ 0.83
KCNK3-201ENST00000302909 TXLNBQ8N3L3 684 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 ZKSCAN5Q9Y2L8 839 aa20.24■□□□□ 0.83
KCNK3-201ENST00000302909 CBFA2T2O43439 604 aa20.23■□□□□ 0.83
KCNK3-201ENST00000302909 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
KCNK3-201ENST00000302909 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
KCNK3-201ENST00000302909 KLHL40Q2TBA0 621 aa20.23■□□□□ 0.83
KCNK3-201ENST00000302909 GIMAP6Q6P9H5 292 aa20.22■□□□□ 0.83
KCNK3-201ENST00000302909 RAI14Q9P0K7 980 aa20.22■□□□□ 0.83
KCNK3-201ENST00000302909 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
KCNK3-201ENST00000302909 SFPQP23246 707 aaKnown RBP eCLIP20.22■□□□□ 0.83
KCNK3-201ENST00000302909 JAKMIP3Q5VZ66 844 aa20.22■□□□□ 0.83
KCNK3-201ENST00000302909 RALYLQ86SE5 291 aaKnown RBP20.22■□□□□ 0.83
KCNK3-201ENST00000302909 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
KCNK3-201ENST00000302909 MAGEC2Q9UBF1 373 aaPredicted RBP20.22■□□□□ 0.83
KCNK3-201ENST00000302909 NACADO15069 1562 aa20.22■□□□□ 0.83
KCNK3-201ENST00000302909 SNW1Q13573 536 aaKnown RBP20.21■□□□□ 0.83
KCNK3-201ENST00000302909 TWISTNBQ3B726 338 aaPredicted RBP20.21■□□□□ 0.83
KCNK3-201ENST00000302909 ATP2C2O75185 946 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 FYB1O15117 783 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 CERS3Q8IU89 383 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 GTF3C6Q969F1 213 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 MICALL1Q8N3F8 863 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 ERICH2A1L162 156 aa20.2■□□□□ 0.82
KCNK3-201ENST00000302909 TMC6Q7Z403 805 aa20.19■□□□□ 0.82
KCNK3-201ENST00000302909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
KCNK3-201ENST00000302909 ARHGAP29Q52LW3 1261 aa20.19■□□□□ 0.82
KCNK3-201ENST00000302909 C17orf53Q8N3J3 647 aaPredicted RBP20.19■□□□□ 0.82
KCNK3-201ENST00000302909 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
KCNK3-201ENST00000302909 TTC31Q49AM3 519 aaPredicted RBP20.19■□□□□ 0.82
KCNK3-201ENST00000302909 NGDNQ8NEJ9 315 aaKnown RBP20.19■□□□□ 0.82
KCNK3-201ENST00000302909 ZFYVE27Q5T4F4 411 aa20.19■□□□□ 0.82
KCNK3-201ENST00000302909 MIA2Q96PC5 1412 aa20.18■□□□□ 0.82
KCNK3-201ENST00000302909 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
KCNK3-201ENST00000302909 FAM107BQ9H098 131 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
KCNK3-201ENST00000302909 TSC1Q92574 1164 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 SEC24BO95487 1268 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 KRBA2Q6ZNG9 492 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
KCNK3-201ENST00000302909 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 KIAA1328Q86T90 577 aa20.17■□□□□ 0.82
KCNK3-201ENST00000302909 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 MYO6Q9UM54 1294 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 NF2P35240 595 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 CCDC148Q8NFR7 591 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 PAXBP1Q9Y5B6 917 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 CPLX3Q8WVH0 158 aa20.16■□□□□ 0.82
KCNK3-201ENST00000302909 DNA2P51530 1060 aa20.15■□□□□ 0.82
KCNK3-201ENST00000302909 ISM2Q6H9L7 571 aa20.15■□□□□ 0.82
KCNK3-201ENST00000302909 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
KCNK3-201ENST00000302909 SMARCC1Q92922 1105 aaPredicted RBP20.15■□□□□ 0.82
KCNK3-201ENST00000302909 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
KCNK3-201ENST00000302909 ANKRD62A6NC57 917 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms